Job Description P0AG07 Confidence 56.48% Date Thu Jan 5 11:27:45 GMT 2012 Rank 478 Aligned Residues 172 % Identity 16% Template c3daqB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from methicillin-2 resistant staphylococcus aureus Resolution 1.45 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.																										.	.
Query SS confidence																																																		.	.	.	.	.																										.	.
Query Sequence		S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	.	.	.	.	.	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	V	P	D	F	A	A	A	.	.
Query Conservation																																																		.	.	.	.	.																										.	.
Alig confidence																											.	.	.																					.	.	.	.	.																										.	.
Template Conservation																											.	.	.
Template Sequence		K	V	N	L	E	A	L	K	A	H	V	N	F	L	L	E	N	N	A	Q	A	I	I	V	N	.	.	.	G	T	T	A	E	S	P	T	L	T	T	D	E	K	E	L	I	L	K	T	V	I	D	L	V	D	K	R	V	P	V	I	A	G	T	G	T	N	D	T	E	K	S	I	Q	A	S	I	Q	A	K	A
Template Known Secondary structure																		T	T							S	.	.	.	S	G	G	G	T	G	G	G	S																	T	T	S	S									S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
			85	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.								.	.	.	.	.																			.								.	.	.	.	.
Query SS confidence		.								.	.	.	.	.																			.								.	.	.	.	.
Query Sequence		.	G	A	S	I	I	T	F	.	.	.	.	.	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	.	G	C	K	A	G	L	V	.	.	.	.	.	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P
Query Conservation		.								.	.	.	.	.																			.								.	.	.	.	.
Alig confidence		.								.	.	.	.	.																			.								.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	A	D	A	I	M	L	I	T	P	Y	Y	N	K	T	N	Q	R	G	L	V	K	H	F	E	A	I	A	D	A	V	K	L	P	V	V	L	Y	N	V	P	S	R	T	N	M	T	I	E	P	E	T	V	E	I	L	S	Q	.	.	.	.	.	.	.	.	.	.	H	P	Y	I	V	A	L	K	D	A	T
Template Known Secondary structure			T		S									S	S																				S												S													T	.	.	.	.	.	.	.	.	.	.	S	T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.											.	.	.	.	160	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A
Query Conservation
Alig confidence															.	.											.	.	.
Template Conservation															.	.											.	.	.
Template Sequence		N	D	F	E	Y	L	E	E	V	K	K	R	I	.	.	D	T	N	S	F	A	L	Y	S	G	.	.	.	N	D	D	N	V	V	E	Y	Y	Q	R	G	G	Q	G	V	I	S	V	I	A
Template Known Secondary structure												T	T	S	.	.		T	T	T	S					S	.	.	.		G	G	G							T	T							S	G	G
Template Predicted Secondary structure															.	.											.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions