Job Description P0AG07 Confidence 82.84% Date Thu Jan 5 11:27:45 GMT 2012 Rank 391 Aligned Residues 190 % Identity 13% Template c3d0cB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution Resolution 1.90 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.															.	.
Query SS confidence																																																				.	.	.	.	.															.	.
Query Sequence		S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	.	.	.	.	.	T	A	P	I	D	V	H	L	M	V	K	P	V	D	.	.	R	I	V	P	D	F	A	A	A
Query Conservation																																																				.	.	.	.	.															.	.
Alig confidence																								.	.	.																										.	.	.	.	.															.	.
Template Conservation																								.	.	.
Template Sequence		E	I	D	W	K	G	L	D	D	N	V	E	F	L	L	Q	N	G	I	E	V	I	.	.	.	V	P	N	G	N	T	G	E	F	Y	A	L	T	I	E	E	A	K	Q	V	A	T	R	V	T	E	L	V	N	G	R	A	T	V	V	A	G	I	G	Y	S	V	D	T	A	I	E	L	G	K	S	A	I	D	S
Template Known Secondary structure			B															T	T					.	.	.		T	T	S	G	G	G	T	G	G	G	S																	T	T	S	S								S	S														T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		85	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.																.									.
Query SS confidence											.	.	.	.	.																.									.
Query Sequence		G	A	S	I	I	T	F	H	P	.	.	.	.	.	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	.	N	G	C	K	A	G	L	V	.	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K
Query Conservation											.	.	.	.	.																.									.
Alig confidence											.	.	.	.	.																.									.																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	D	C	V	X	I	H	Q	P	V	H	P	Y	I	T	D	A	G	A	V	E	Y	Y	R	N	I	I	E	A	L	D	A	P	S	I	I	Y	F	K	D	A	H	L	S	D	D	V	I	K	E	L	A	P	.	.	.	.	.	.	.	.	.	.	L	D	K	L	V	G	I	K	Y	A	I	N	D	I	Q	R
Template Known Secondary structure		T		S										S																		S	S	S									T	T	S		T							T	T	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.											.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S
Query Conservation
Alig confidence																				.	.	.
Template Conservation																				.	.	.
Template Sequence		V	T	Q	V	X	R	A	V	P	K	S	S	N	V	A	F	I	C	.	.	.	G	T	A	E	K	W	A	P	F	F	Y	H	A	G	A	V	G	F	T	S	G	L	V	N	V	F	P	Q	K	S	F	A	L	L	E	A	L	E	E
Template Known Secondary structure									S		G	G	G							.	.	.	T	T												T							S	G	G	G	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions