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Job DescriptionP0AG07
Confidence100.00%DateThu Jan 5 11:27:45 GMT 2012
Rank1Aligned Residues215
% Identity26%Templatec3cu2A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPD
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Template Sequence  LKQQKLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFP. . . THCFKDVHLXVRNQLEVAKA
Template Known Secondary structure  TT

GGGS
GGGTT

BSSSSS
B
B
TTS
...TTS
S
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   10.........20.........30.........40.........50.........60...... ...70.........80......
 
   81........90.........100........ .110.........120.........130.........140.........150.
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Query Sequence  FAAAGASIITFHPEASEHVDRTLQLIKE. . . . . . . . . NGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFI
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Template Sequence  VVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQLLTLDPRNGTKYPS
Template Known Secondary structure  TT
STT
TTSTT
TT

TTS
GGGGTTTTTT
SSTTTT

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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   152.......160.........170.........180.........190... ......200.........210.........
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Query Sequence  PQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGA. . DMFVAGSAIFDQPDYKKVIDEMRSEL
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Template Sequence  ELILDRVIQVEKRLGNRRVEKLINIDGSXTLELAKYFKQGTHQIDWLVSGSALFS. GELKTNLKVWKSSI
Template Known Secondary structure  GGGGGG
SS

SSS




GGGGS.S

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   167..170.........180.........190.........200.........210.........220. ........230.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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