Job Description P0AG07 Confidence 93.12% Date Thu Jan 5 11:27:45 GMT 2012 Rank 331 Aligned Residues 208 % Identity 12% Template c3cqkB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:l-ribulose-5-phosphate 3-epimerase ulae; PDBTitle: crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b)2 complex with zn2+ and sulfate Resolution 2.33 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.																						.	.
Predicted Secondary structure																															.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	.	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D
Query Conservation																															.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	L	E	R	L	Q	L	A	K	T	L	G	F	D	F	V	E	M	S	V	D	E	T	D	E	R	L	S	R	L	D	W	S	R	E	Q	R	L	A	L	V	N	A	I	V	E	T	G	V	R	V	P	S	M	C	L	S	A	H	R	R	F	P	L	G	S	E	D	D	A	V	R	A	Q	G	L	E	I	M	R
Template Known Secondary structure												T	T		S								S	S					G	G	G	G																			B							G	G	G	G	T	S		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.															.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	.	.	.	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		K	A	I	Q	F	A	Q	D	V	G	I	R	V	I	Q	L	A	G	Y	D	V	Y	Y	Q	E	A	N	N	E	T	R	R	R	F	R	D	G	L	K	E	S	V	E	M	A	S	R	A	Q	V	T	L	A	M	E	I	M	D	Y	P	L	M	N	S	I	S	K	A	L	G	Y	A	H	Y	L	N	N	P	W	F
Template Known Secondary structure											T										S		S	S	S																									T									S	S	G	G	G	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.																		.																				.
Query SS confidence																															.	.	.	.	.	.	.	.																		.																				.
Query Sequence		M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	.	.	.	.	.	.	.	.	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	.	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	.	D	Q	P	D	Y
Query Conservation																															.	.	.	.	.	.	.	.																		.																				.
Alig confidence																															.	.	.	.	.	.	.	.																		.																				.
Template Conservation
Template Sequence		Q	L	Y	P	D	I	G	N	L	S	A	W	D	N	D	V	Q	M	E	L	Q	A	G	I	G	H	I	V	A	V	H	V	K	D	T	K	P	G	V	F	K	N	V	P	F	G	E	G	V	V	D	F	E	R	C	F	E	T	L	K	Q	S	G	Y	C	G	P	Y	L	I	E	M	W	S	E	T	A	E	D	P
Template Known Secondary structure						B						S	S	S										T	G	G	G	B										S	S			S				T	T	S	S	S														T			S								T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	V	I	D	E	M	R	S	E	L	A	K	V	S	H	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	E	V	A	K	A	R	D	W	V	K	A	R	M	A	K
Template Known Secondary structure																		T
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions