Job Description P0AG07 Confidence 97.83% Date Thu Jan 5 11:27:45 GMT 2012 Rank 187 Aligned Residues 189 % Identity 16% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		1	.	.		.	.	.	.	.	.	10									.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure					.								.	.	.	.	.	.	.	.
Query SS confidence					.								.	.	.	.	.	.	.	.
Query Sequence		M	K	Q	.	Y	L	I	A	P	S	I	.	.	.	.	.	.	.	.	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V
Query Conservation					.								.	.	.	.	.	.	.	.
Alig confidence					.								.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		M	R	E	W	K	I	I	D	S	T	L	R	E	G	E	Q	F	E	K	A	N	F	S	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	G	I	E	Y	I	E	V	.	.	.	.	.	T	T	P	V	A	S	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	T	H	I	Q	C
Template Known Secondary structure													T	G	G	G	G	S	T	T																			T		S					.	.	.	.	.			G	G	G														S			S	S								S
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.										.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																										.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.																										.	.	.	.
Query Sequence		K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	.	.	.	.	.	.	.	.	.	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	.	.	.	.	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L
Query Conservation																										.	.	.	.	.	.	.	.	.																										.	.	.	.
Alig confidence			.	.																						.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation			.	.
Template Sequence		R	.	.	L	D	A	A	K	V	A	V	E	T	G	V	Q	G	I	D	L	L	F	G	T	S	K	G	R	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D	L	L	A	V	Y	E	A	V	A	P	Y	V	D
Template Known Secondary structure			.	.										T	T		S								S																									T	T	S							S	S	T	T	T	S													G	G	G		S
Template Predicted Secondary structure			.	.
Template SS confidence
		76			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	.	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		R	V	G	L	A	D	T	V	G	V	A	T	P	R	Q	V	Y	A	L	V	R	E	V	R	R	V	V	G	P	R	V	D	I	E	F	H	G	H	N	D	T	G	C	A	I	A	N	A	Y	E	A	I	E	A	G	A	T	H	V
Template Known Secondary structure								T	T	S																			T	T	T	S							B		T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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