Job Description P0AG07 Confidence 94.06% Date Thu Jan 5 11:27:45 GMT 2012 Rank 318 Aligned Residues 214 % Identity 12% Template c2zvrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:uncharacterized protein tm_0416; PDBTitle: crystal structure of a d-tagatose 3-epimerase-related2 protein from thermotoga maritima Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		Q	Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence															.																				.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation															.																				.	.	.	.	.
Template Sequence		K	L	S	L	V	I	S	T	S	D	F	K	G	.	D	L	R	K	G	M	E	L	A	K	R	V	G	Y	Q	A	V	E	I	.	.	.	.	.	A	V	R	D	P	S	I	V	D	W	N	E	V	K	I	L	S	E	E	L	N	L	P	I	C	A	I	G	T	G	Q	A	Y	L	A	D	G	L	S	L	T	H
Template Known Secondary structure															.													T		S					.	.	.	.	.			S		G	G	G	S													T									T					T	T				T	T
Template Predicted Secondary structure															.																				.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
														74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.											.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	.	.	.	.	.	.	.	.	.	.	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	.	.	.	.	.	.	.	.	T	P	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	N	D	E	I	R	K	K	A	I	E	R	V	V	K	H	T	E	V	A	G	M	F	G	A	L	V	I	I	G	L	V	R	G	R	R	E	G	R	S	Y	E	E	T	E	E	L	F	I	E	S	M	K	R	L	L	E	L	T	E	H	A	K	F	V	I	E	P	L	N	R	Y	E	T	D	F	I	N	T	I
Template Known Secondary structure		S	S																						T						S	G	G	G				T	T	S																					S	S										T	T	T		S	S			S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.																		.
Query SS confidence																																														.	.	.																		.
Query Sequence		S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	.	.	.	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	.	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G
Query Conservation																																														.	.	.																		.
Alig confidence																																														.	.	.																		.
Template Conservation
Template Sequence		D	D	A	L	R	I	L	R	K	I	N	S	N	R	V	G	I	L	A	D	T	F	H	M	N	I	E	E	V	N	I	P	E	S	L	K	R	A	G	E	K	L	Y	H	F	H	V	A	D	S	N	R	W	A	P	G	C	G	H	F	D	F	R	S	V	F	N	T	L	K	E	I	G	Y	N	R	Y	V	S	V
Template Known Secondary structure														T	T															S	S									G	G	G									T	T	S	S	S	T	T	S	S														T	T			S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S	E	L	A	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	C	L	P	L	P	G	G	M	E	E	A	A	E	I	A	F	K	T	L	K	E	L
Template Known Secondary structure					S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions