Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG07
Confidence87.69%DateThu Jan 5 11:27:45 GMT 2012
Rank372Aligned Residues163
% Identity15%Templatec2yswB_
PDB info PDB header:lyaseChain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of the 3-dehydroquinate dehydratase from aquifex2 aeolicus vf5
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70 .......
Predicted Secondary structure 



























......


Query SS confidence 


































































. . . . . .






Query Sequence  YLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLM. . . . . . VKPVDRI
Query Conservation    
 
 
   
     
        
   


 
 

 
      
   
  
            
 ......       
Alig confidence 













...















.
































......






Template Conservation    


 
   
  
...         

 



.

 
              
     


 
 
   


         
Template Sequence  MLIAVPLDDTNFSE. . . NLKKAKEKGADIVELR. VDQFSDTSLNYVKEKLEEVHSQGLKTILTIRSPEEGGREVKNREEL
Template Known Secondary structure 

STT...TT
S.GGG
S


TT



GGGT



TT
Template Predicted Secondary structure 




...



.

















Template SS confidence 















































































   1........10.... .....20.........30 .........40.........50.........60.........70......
 
   78.80.........90.........100.........110........ .120.........130.........140.........150...
Predicted Secondary structure 













....


















Query SS confidence 








































. . . .


































Query Sequence  VPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFN. . . . PATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQ
Query Conservation 
      


 
 
                  
    
 
 ....  
  
           
       
         
Alig confidence 



.



































....















.......











Template Conservation     
.      




                  


 
 
 
  

    
         .......  

 


    
Template Sequence  FEEL. SPLSDYTDIELSSRGLLVKLYNITKEAGKKLIISYHNFELTPPNWIIREVLREGYR. . . . . . . YGGIPKIAVKAN
Template Known Secondary structure  .GGGSSTT
TT
SS



.......TTS
S
Template Predicted Secondary structure  .
















.......





Template SS confidence 















































































   77..80 .........90.........100.........110.........120.........130...... ...140........
 
   154.....160.........170........
Predicted Secondary structure 








Query SS confidence 
























Query Sequence  TLDKLREVRRRIDESGFDIRLEVDG
Query Conservation      
  
            
   
Alig confidence 
























Template Conservation     
   

        
 
   

Template Sequence  SYEDVARLLCISRQVEGEKILISMG
Template Known Secondary structure  STTS
S
BT
Template Predicted Secondary structure 






Template SS confidence 
























   149150.........160.........170...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions