Job Description P0AG07 Confidence 71.13% Date Thu Jan 5 11:27:45 GMT 2012 Rank 440 Aligned Residues 192 % Identity 15% Template c2pz0B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis Resolution 1.91 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.
Predicted Secondary structure																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	Q	Y	L	I	A	P	S	I	L	S	A	D	F	A	.	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	T	L	V	I	A	H	R	G	D	S	K	N	V	P	E	N	T	I	A	A	F	K	R	A	M	E	L	G	A	D	G	I	E	L	D	V	Q	L	T	K	D	G	H	L	V	V	I	H	D	E	T	V	D	R	T	T	N	G	E	G	F	V	K	D	F	T	L	E	E	I	K	K	L	D	A	G	I	K
Template Known Secondary structure										T	T	T	T	T	T	S		T	T	S											T		S										T	T							S	S	S	B	S	T	T	T	S	S			S	B	G	G	G	S						T	T	S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
			38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure		.																																					.	.	.	.																.
Query SS confidence		.																																					.	.	.	.																.
Query Sequence		.	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	.	.	.	.	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	.	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C
Query Conservation		.																																					.	.	.	.																.
Alig confidence		.																																					.	.	.	.																.																.	.
Template Conservation																																																																										.	.
Template Sequence		F	G	E	K	F	A	G	E	R	I	P	T	L	Y	E	V	F	E	L	I	G	D	K	D	F	L	V	N	I	E	I	K	S	G	I	V	L	Y	P	G	I	E	E	K	L	I	K	A	I	K	E	Y	N	F	E	E	R	V	I	I	S	S	F	N	H	Y	S	L	R	D	V	K	.	.	K	M	A	P	H	L
Template Known Secondary structure		T		G	G	G	T	T					B									T	T	S											S	S	S			T	T												T	T		T	T	T						S										.	.				T	T	S
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Sequence		K	I	G	L	L	Y	Q	C	G	L	V	E	P	W	H	M	A	L	R	M	E	A	Y	S	L	H	.	.	.	.	.	.	.	.	.	.	P	F	Y	F	N	I	I	P	E	L	V	E	G	C	K	K	N	.	.	.	.	.	.	G	V	K	L	F	P	W	T	V	D	R	K	E	D	M	E	R	M	I	K	A
Template Known Secondary structure									S			S	S	T							T	T		S				.	.	.	.	.	.	.	.	.	.		B	G	G	G											T	T	.	.	.	.	.	.	T						B				S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.											.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S
Query Conservation
Alig confidence									.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.
Template Sequence		G	V	D	G	I	I	T	.	.	.	.	.	.	.	D	D	P	E	T	L	I	N	L	V	R	K
Template Known Secondary structure		T		S					.	.	.	.	.	.	.	S										T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.								.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions