Job Description P0AG07 Confidence 53.34% Date Thu Jan 5 11:27:45 GMT 2012 Rank 490 Aligned Residues 202 % Identity 16% Template c2ou4C_ PDB info PDB header:isomerase Chain: C: PDB Molecule:d-tagatose 3-epimerase; PDBTitle: crystal structure of d-tagatose 3-epimerase from2 pseudomonas cichorii Resolution 2.50 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.																	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	D	R	I	V	P	D	F
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.
Template Sequence		F	P	A	T	A	K	R	I	A	G	L	G	F	D	L	M	E	I	S	L	G	E	F	H	N	L	S	D	A	K	K	.	R	E	L	K	A	V	A	D	D	L	G	L	T	V	M	C	C	I	G	L	K	S	E	Y	D	F	A	S	P	D	K	S	V	R	D	A	G	T	E	Y	V	K	R	L	L	D	D	C
Template Known Secondary structure												T	T		S						S	T	T	G	G	G	S						.											T											G	G	G		T	T		S
Template Predicted Secondary structure																																	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.																					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		A	A	A	G	A	S	I	I	T	F	H	P	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	.	.	.	.	.	.	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		H	L	L	G	A	P	V	F	A	G	L	T	F	C	A	W	P	Q	S	P	P	L	D	M	K	D	K	R	P	Y	V	D	R	A	I	E	S	V	R	R	V	I	K	V	A	E	D	Y	G	I	I	Y	A	L	E	V	V	N	R	F	E	Q	W	L	C	N	D	A	K	E	A	I	A	F	A	D	A	V	D	S
Template Known Secondary structure					T		S							S	S		S	S					T	T				S													T	T								T										T	T	T		S	S			S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																		.	.	.																		.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.																		.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	.	.	.	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	.	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.	.	.																		.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.																		.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	C	K	V	Q	L	D	T	F	H	M	N	I	E	E	T	S	F	R	D	A	I	L	A	C	K	G	K	M	G	H	F	H	L	G	E	A	N	R	L	P	P	G	E	G	R	L	P	W	D	E	I	F	G	A	L	K	E	I	G	Y	D	G	T	I	V	M	E	P	F	M	R	K	G	G	S	V	S	R
Template Known Secondary structure		T	T															S									T	T	T										T	T	S			T	T	S	S		S												T	T			S											S	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
								201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S	E	L	A
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	G	V	W	R	D	M	S	N	G	A	T	D	E	E	M	D	E	R	A	R	R	S	L	Q
Template Known Secondary structure			T	T			S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions