Job Description P0AG07 Confidence 94.81% Date Thu Jan 5 11:27:45 GMT 2012 Rank 311 Aligned Residues 165 % Identity 13% Template c2o7qA_ PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h) Resolution 2.20 Å

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		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.										.	.	70
Predicted Secondary structure					.																																																																	.	.	.	.	.	.	.	.	.
Query SS confidence					.																																																																	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	Q	.	Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	.	.	.	.	.	.	.	.	.	H	L	M
Query Conservation					.																																																																	.	.	.	.	.	.	.	.	.
Alig confidence					.																																			.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.
Template Sequence		V	K	N	P	S	L	I	C	A	P	V	M	A	D	S	I	D	K	M	V	I	E	T	S	K	A	H	E	L	G	A	D	L	V	E	I	R	L	.	.	.	D	W	L	K	D	F	N	P	L	E	D	L	K	T	I	I	K	K	S	P	L	P	T	L	F	T	Y	R	P	K	W	E	G	G	Q	Y	E	G	D
Template Known Secondary structure				S											S	S															T		S						G	.	.	.	G	G		S	S															S	S								B	G	G	G	T	S	S	B		S
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																			.	.	.													.	.	.	.	.
Query SS confidence																																																			.	.	.													.	.	.	.	.
Query Sequence		V	K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	.	.	.	A	T	P	L	S	Y	L	D	Y	V	M	D	.	.	.	.	.	K	L	D	V	I	L	L	M	S	V	N
Query Conservation																																																			.	.	.													.	.	.	.	.
Alig confidence																																																			.	.	.													.	.	.	.	.						.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		E	N	E	R	R	D	V	L	R	L	A	M	E	L	G	A	D	Y	I	D	V	E	L	Q	V	A	S	E	F	I	K	S	I	D	G	K	K	P	G	K	F	K	V	I	V	S	S	H	N	Y	Q	N	T	P	S	V	E	D	L	D	G	L	V	A	R	I	Q	Q	T	G	A	D	I	V	.	.	.	.	.	.
Template Known Secondary structure															T	T		S																T	T	T				S	S										S	S																		T	T		S			.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	K	I	A	T	T	A	V	D	I	A	D	V	A	R	M	F	H	I	T	S	K	A	Q	V	P	T	I	G	L	V	M	G
Template Known Secondary structure		.	.	.	.							S	S	G	G	G												S	S								S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions