 |
Job Description | P0AG07 | Confidence | 67.39% | Date | Thu Jan 5 11:27:45 GMT 2012 |
Rank | 452 | Aligned Residues | 112 |
% Identity | 13% | Template | c2fmoA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:5,10-methylenetetrahydrofolate reductase; |
PDBTitle: ala177val mutant of e. coli methylenetetrahydrofolate2 reductase
|
Resolution | 2.25 Å |
|
 |
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
|
. |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
Query Sequence |   |
D | F | A | R | L | G | E | D | T | A | K | A | L | A | A | G | A | D | V | V | H | F | D | V | M | D | N | H | Y | V | P | N | L | T | I | G | P | M | V | L | K | S | L | R | N | Y | G | I | T | A | P | I | D | V | . |
. |
. |
. |
. |
. |
H | L | M | V | K | P | V | D | R | I | V | P | D | F | A | A | . |
. |
. |
A |
Query Conservation |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   | . | . | . | . | . |
|   |
|
|   |
|   |   |
|   |
|
|
|   |   |
|
|   |   | . |   |   |   |   |
|
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
Template Sequence |   |
T | P | D | E | L | R | T | I | A | R | D | Y | W | N | N | G | I | R | H | I | V | A | . |
. |
. |
. |
. |
L | R | G | D | L | E | M | Y | A | S | D | L | V | T | L | L | K | E | V | . |
A | D | F | D | I | S | V | A | A | Y | P | E | V | H | P | E | A | K | S | A | Q | A | D | L | L | N | L | K | R | K | V | D | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | S |
|
|  |  |  |  |  |  |
| T | T |
|
| T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | |
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | S | I | I | T | F | . |
H | P | E | A | S | E | H | V | D | R | T | L | Q | L | I | K | E | N | G | . |
. |
C | K | A | G | L | V | F | N | P | A | T | P | L | S | Y | L | D | Y | V | M | D |
Query Conservation |   |
|
|
|   |
|   |
| . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . |   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | V | N | R | A | I | T | Q | F | F | F | D | V | E | S | Y | L | R | F | R | D | R | C | V | S | A | G | I | D | V | E | I | I | P | G | I | L | P | V | S | N | F | K | Q | A | K | K | F | A | D |
Template Known Secondary structure |   |
T |
| S |  |  |  |  |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |
|  |  |
|
|
| S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|