Job Description P0AG07 Confidence 99.18% Date Thu Jan 5 11:27:45 GMT 2012 Rank 86 Aligned Residues 171 % Identity 12% Template c2fdsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:orotidine-monophosphate-decarboxylase; PDBTitle: crystal structure of plasmodium berghei orotidine 5'-2 monophosphate decarboxylase (ortholog of plasmodium3 falciparum pf10_0225) Resolution 1.72 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																.
Query SS confidence																		.	.																.
Query Sequence		M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	.	.	V	H	L	M	V	K	P	V	D	R	I	V	P	D	F	.	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D
Query Conservation																		.	.																.
Alig confidence																		.	.																.
Template Conservation
Template Sequence		N	V	F	D	Y	L	N	S	M	N	I	P	T	M	L	D	M	K	I	N	D	I	G	N	T	V	K	N	Y	R	K	F	I	F	E	Y	L	K	S	D	S	C	T	I	N	V	Y	M	G	T	S	M	L	K	D	I	C	F	D	Y	E	K	N	K	Y	Y	S	A	Y	V	L	I	K	T	T	N	K	D	S	F
Template Known Secondary structure										T	T																									T	T	S			S							T	T		S	T	T					S			T	T	T	T												S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		128	.	130	.	.													.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		Y	V	M	D	K	.	.	.	.	.	.	.	.	.	.	.	.	L	D	V	I	L	L	M	S	V	N	P	G	F	G	.	.	.	.	.	.	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.																			.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence		I	F	Q	N	E	L	S	I	N	D	K	Q	A	Y	I	V	M	A	E	E	T	Q	K	M	A	T	D	L	K	I	D	Q	N	N	E	F	I	G	F	V	V	G	S	N	A	F	E	E	M	K	I	I	R	N	K	.	.	.	.	F	P	D	S	Y	I	L	S	P	G	I	D	L	Y	K	T	L	K	N	G	Y
Template Known Secondary structure					T	T				T	T																			T	T	G	G	G	T									T	T												.	.	.	.	S	T	T
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S	E	L	A	K	V	S	H	E
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		N	K	D	Y	E	K	L	L	I	N	V	G	R	A	I	T	K	S	P	N	P	K	K	S	S	E	S	Y	Y	N	Q	I	I	Q	I	F	K	D
Template Known Secondary structure			S	S	G	G	G											T	S	S
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions