Job Description P0AG07 Confidence 99.90% Date Thu Jan 5 11:27:45 GMT 2012 Rank 17 Aligned Residues 210 % Identity 16% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																					.	.	.	.	.	.	.
Predicted Secondary structure														.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	Y	L	I	A	P	S	I	L	S	A	.	.	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	S	L	R	N	Y
Query Conservation														.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																									.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.
Template Sequence		R	E	K	A	L	V	S	Y	L	M	V	G	Y	P	D	Y	E	T	S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	.	.	.	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	E	D	V	L	E	L	S	E	T	L	R	K	E
Template Known Secondary structure		T	B									T	T	S	S															T	T		S							.	.	.			S			T	T	S														T	T
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	.	.	.	.	.	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.
Template Conservation
Template Sequence		F	P	D	I	P	F	L	L	M	T	Y	Y	N	P	I	F	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	P	D	L	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P	L	G	A	P	T	S	T	R	K	R	I	K	L	I	C	E	A	A	D
Template Known Secondary structure			T	T	S																										T	T							T	T																T	T									T	T														S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	.	.	P	D	Y	K	K	V	I
Query Conservation																																																																									.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																																		.															.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		E	M	T	Y	F	V	S	V	T	G	Y	E	R	.	.	.	.	.	.	.	.	.	.	I	K	K	K	V	E	E	Y	R	E	L	C	D	K	P	V	V	V	G	F	G	V	S	K	K	E	H	A	R	E	I	G	S	.	F	A	D	G	V	V	V	G	S	A	L	V	K	L	A	G	Q	K	K	I	E	D	L
Template Known Secondary structure		S						S	S						.	.	.	.	.	.	.	.	.	.														S						S	S			S									T	.	T	S	S														T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.											.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		213	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	M	R	S	E	L	A	K	V	S	H	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	L	V	K	E	L	K	E	G	L	R	E
Template Known Secondary structure											T	T	B
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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