Job Description P0AG07 Confidence 99.46% Date Thu Jan 5 11:27:45 GMT 2012 Rank 72 Aligned Residues 192 % Identity 15% Template c1znnF_ PDB info PDB header:biosynthetic protein Chain: F: PDB Molecule:plp synthase; PDBTitle: structure of the synthase subunit of plp synthase Resolution 2.20 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V
Query Conservation
Alig confidence													.	.											.	.																.																	.
Template Conservation													.	.											.	.																.																	.
Template Sequence		E	Q	A	K	I	A	E	A	A	G	A	.	.	V	A	V	M	A	L	E	G	G	V	.	.	A	R	M	A	D	P	T	V	I	E	E	V	M	N	A	.	V	S	I	P	V	M	A	K	V	R	I	G	H	Y	V	E	.	A	R	V	L	E	A	L	G	V	D	Y	I	D	E	S	E	V	L	T	P	A	D
Template Known Secondary structure										T	T		.	.	S										.	.			S													.		S	S								T	T					.							T	T		S						T	T	S			S
Template Predicted Secondary structure													.	.											.	.																.																	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																									.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	.	.	P	Q
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		E	E	F	H	I	D	K	R	Q	F	T	V	P	F	V	C	G	C	R	D	L	G	E	A	A	R	R	I	A	E	G	A	S	M	L	R	T	K	G	E	P	G	T	G	N	I	V	E	A	V	R	H	M	R	K	V	N	A	Q	I	R	K	V	V	N	M	S	E	D	E	L	V	A	E	A	K	Q	L	G	A
Template Known Secondary structure		S	S					G	G	G		S	S							S	S										T	T		S								T	T	S	S																						S		G	G	G									T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G	S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S	E	L
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		P	V	E	V	L	R	E	I	K	R	L	G	.	.	R	L	P	V	V	N	F	A	A	G	G	V	T	T	P	A	D	A	A	L	M	M	H	L	G	A	D	G	V	F	V	G	S	G	I	F	K	S	E	N	P	E	K	Y	A	R	A	I	V	E	A	T
Template Known Secondary structure													T	.	.	S		S	S						S	S			S										T	T		S						T					S	S	S
Template Predicted Secondary structure														.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions