Job Description P0AG07 Confidence 96.00% Date Thu Jan 5 11:27:45 GMT 2012 Rank 282 Aligned Residues 197 % Identity 16% Template c1zlpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:petal death protein; PDBTitle: petal death protein psr132 with cysteine-linked glutaraldehyde forming2 a thiohemiacetal adduct Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.											.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.																																						.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.																																						.
Query Sequence		K	Q	Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	.	.	.	.	.	.	.	.	.	.	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.																																						.
Alig confidence														.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.												.																										.
Template Conservation														.	.	.	.	.	.																																				.
Template Sequence		H	G	S	V	L	M	P	G	V	Q	D	A	.	.	.	.	.	.	L	S	A	A	V	V	E	K	T	G	F	H	A	A	F	V	S	G	Y	S	V	S	A	A	M	L	G	L	P	D	F	G	L	L	T	.	T	T	E	V	V	E	A	T	R	R	I	T	A	A	A	P	N	L	C	V	V	V	D	G	D	T
Template Known Secondary structure		S	S	S								S		.	.	.	.	.	.									T	T		S																		S	S	S		S		.															S	S	S	S							T	T
Template Predicted Secondary structure														.	.	.	.	.	.																																				.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
						71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure		.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	V	K	P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	G	G	P	L	N	V	Q	R	F	I	R	E	L	I	S	A	G	A	K	G	V	F	L	E	D	Q	V	W	P	K	K	C	G	H	M	R	G	K	A	V	V	P	A	E	E	H	A	L	K	I	A	A	A	R	E	A	I	G	D	S	D	F	F	L	V	A	R	T	D	A	R	A	P	H	G	L	E	E
Template Known Secondary structure			S	S	S														T	T									B		S	S				S	S	S	S				B																		T	T	S										T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		122	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																																					.
Query SS confidence												.																																																					.
Query Sequence		P	L	S	Y	L	D	Y	V	M	D	.	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	.	N	I	G	E	I	A	A	A	G	A	D	M	F	V	A	G
Query Conservation												.																																																					.
Alig confidence												.										.	.	.	.	.	.	.	.	.	.	.															.	.																	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		G	I	R	R	A	N	L	Y	K	E	A	G	A	D	A	T	F	V	E	A	.	.	.	.	.	.	.	.	.	.	.	P	A	N	V	D	E	L	K	E	V	S	A	K	T	.	.	K	G	L	R	I	A	N	M	I	E	G	G	K	T	P	L	H	T	P	E	E	F	K	E	M	G	F	H	L	I	A	H	S
Template Known Secondary structure												T	T		S							.	.	.	.	.	.	.	.	.	.	.			S											S	.	.		S								T	T	S	S	S												T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210												.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	I	F	D	Q	P	D	Y	K	K	V	I	D	E	M	R	S	E	L	A	K	V	S
Query Conservation
Alig confidence						.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		L	T	A	V	.	.	.	.	.	Y	A	T	A	R	A	L	V	N	I	M	K	I	L	K
Template Known Secondary structure		S				.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		258	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions