Job Description P0AG07 Confidence 98.23% Date Thu Jan 5 11:27:45 GMT 2012 Rank 146 Aligned Residues 210 % Identity 16% Template c1yyaA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of tt0473, putative triosephosphate isomerase from2 thermus thermophilus hb8 Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.
Predicted Secondary structure											.																																																										.	.	.	.
Query SS confidence											.																																																										.	.	.	.
Query Sequence		M	K	Q	Y	L	I	A	P	S	.	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	.	.	.	.	V	H	L	M	V	K	P	V	D
Query Conservation											.																																																										.	.	.	.
Alig confidence											.																				.									.	.	.																											.	.	.	.
Template Conservation																															.									.	.	.
Template Sequence		M	R	R	V	L	V	A	G	N	W	K	M	H	K	T	P	S	E	A	R	V	W	F	A	E	L	K	R	L	.	L	P	P	L	Q	S	E	A	.	.	.	A	V	L	P	A	F	P	I	L	P	V	A	K	E	V	L	A	E	T	Q	V	G	Y	G	A	Q	D	V	S	A	H	K	E	G	A	Y	T	G	E
Template Known Secondary structure													S																		.					S	S			.	.	.						G	G	G									T	T	S	S						S				S	S	S	S	S	S		T	T
Template Predicted Secondary structure																															.									.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.												.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																			.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	.	.	.	.	.	.	.	.	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	.	.	.	.	.	.	.	.	.	.	.	L	S	Y	L	D	Y	V	M	D	K	L	D	.	.
Query Conservation																			.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																			.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		V	S	A	R	M	L	S	D	L	G	C	R	Y	A	I	V	G	H	S	E	R	R	R	Y	H	G	E	T	D	A	L	V	A	E	K	A	K	R	L	L	E	E	G	I	T	P	I	L	C	V	G	E	P	L	E	V	R	E	K	G	E	A	V	P	Y	T	L	R	Q	L	R	G	S	L	E	G	V	E	P	P
Template Known Secondary structure										T	T		S					S								S																	T	T																T	T														T	T	T				S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
							135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.	.	.	.																																.	.	.	.	.	.																										.
Query SS confidence		.	.	.	.	.																																.	.	.	.	.	.																										.
Query Sequence		.	.	.	.	.	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	.	.	.	.	.	.	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	.	A	G	A	D	M	F	V	A	G	S	A	I
Query Conservation		.	.	.	.	.																																.	.	.	.	.	.																										.
Alig confidence		.	.	.	.	.																																.	.	.	.	.	.																										.
Template Conservation
Template Sequence		G	P	E	A	L	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	N	A	T	P	E	D	A	E	A	M	H	Q	A	I	R	K	A	L	S	E	R	Y	G	E	A	F	A	S	R	V	R	I	L	Y	G	G	S	V	N	P	K	N	F	A	D	L	L	S	M	P	N	V	D	G	G	L	V	G	G	A	S
Template Known Secondary structure		S	G	G	G								G	G	G	S	S	S	S																													T	T							S	S			T	T	T						T	S	T	T							S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	Q	P	D	Y	K	K	V	I	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	L	E	S	F	L	A	L	L	R	I
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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