Job Description P0AG07 Confidence 95.48% Date Thu Jan 5 11:27:45 GMT 2012 Rank 296 Aligned Residues 175 % Identity 13% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.																				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	.	.	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K
Query Conservation																						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	K	T	A	F	E	M	V	D	A	A	Y	N	A	G	A	E	V	V	K	H	Q	T	H	I	V	E	D	E	M	S	D	E	A	K	Q	V	I	P	G	N	A	D	V	S	I	Y	E	I	M	E	R	C	A	L	N	E	E	D	E	I	K	L	K	E	Y	V	E	S	K	G	M	I	F	I	S	T	P	F
Template Known Secondary structure																	T		S															G	G	G	G	G				T	T		S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		P	V	D	R	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	.	.	.	.	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q
Query Conservation																																																													.	.	.	.
Alig confidence						.																								.																															.	.	.	.																.	.
Template Conservation						.																								.																																																		.	.
Template Sequence		S	R	A	A	.	A	L	R	L	Q	R	M	D	I	P	A	Y	K	I	G	S	G	E	C	N	N	Y	P	.	L	I	K	L	V	A	S	F	G	K	P	I	I	L	S	T	G	M	N	S	I	E	S	I	K	K	S	V	E	I	I	R	E	A	G	V	P	Y	A	L	L	H	C	T	N	I	Y	P	T	.	.
Template Known Secondary structure		S				.								T		S						G	G	G	T	T				.							T	T		S							T	T																	T												S	S		.	.
Template Predicted Secondary structure						.																								.																																																		.	.
Template SS confidence
		113	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	.	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	G	A	D	M	F
Query Conservation																												.
Alig confidence																		.	.	.	.							.
Template Conservation																		.	.	.	.
Template Sequence		P	Y	E	D	V	R	L	G	G	M	N	D	L	S	E	A	.	.	.	.	F	P	D	A	I	I	G	L	S	D	H	T	L	D	N	Y	A	C	L	G	A	V	A	L	G	G	S	I	L
Template Known Secondary structure								T	T									.	.	.	.		T	T	S								S	S	S	S										T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions