Job Description P0AG07 Confidence 92.07% Date Thu Jan 5 11:27:45 GMT 2012 Rank 342 Aligned Residues 175 % Identity 11% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																						.	.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	.	.	H	F	D	V	M	D	N	H	Y	V	P	N	.	.	.	.	.	.	.	.	.	.	.	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	I	V	P	D
Query Conservation																						.	.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.													.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation																																																																														.
Template Sequence		K	L	D	Q	A	F	A	L	I	D	A	A	A	E	A	G	A	D	A	V	K	F	Q	X	F	Q	A	D	R	X	Y	Q	K	D	P	D	V	S	I	F	S	L	V	Q	S	X	E	X	P	A	E	W	I	L	P	L	L	D	Y	C	R	E	K	Q	V	I	F	L	S	T	V	C	D	E	G	S	.	A	D	L
Template Known Secondary structure																	T		S							B		G	G	G	G	T	S											G	G	G	B	S	S		G	G	G											T	T						B			S				.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	.	.	.	.	.	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F	I	P	Q	T	L
Query Conservation																																																					.	.	.	.	.
Alig confidence																						.																															.	.	.	.	.																.	.
Template Conservation																						.																																																			.	.
Template Sequence		L	Q	S	T	S	P	S	A	F	K	I	A	S	Y	E	I	N	H	L	P	.	L	L	K	Y	V	A	R	L	N	R	P	X	I	F	S	T	A	G	A	E	I	S	D	V	H	E	A	W	R	T	I	R	A	E	G	N	N	Q	I	A	I	X	H	C	V	A	K	Y	P	A	.	.	P	P	E	Y	S	N	L
Template Known Secondary structure				T	T			S						G	G	G	T	T				.							T	T		S							T	T															T	T	T											S	S	S	S		.	.		G	G	G			T
Template Predicted Secondary structure																						.																																																			.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	.	.	N	N	I	G	E	I	A	A	A	G	A	D	M	F
Query Conservation																													.	.
Alig confidence											.	.	.	.															.	.
Template Conservation											.	.	.	.
Template Sequence		S	V	I	P	X	L	A	A	A	.	.	.	.	F	P	E	A	V	I	G	F	S	D	H	S	E	H	P	T	E	A	P	C	A	A	V	R	L	G	A	K	L	I
Template Known Secondary structure		T									.	.	.	.	S	T	T	S									S	S	S	S									T	T		S
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions