Return to main results Retrieve Phyre Job Id

Job DescriptionP0AG07
Confidence66.52%DateThu Jan 5 11:27:45 GMT 2012
Rank455Aligned Residues145
% Identity10%Templatec1vhkA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hypothetical protein yqeu; PDBTitle: crystal structure of an hypothetical protein
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90..... ....100. ........110.........120.........130.......
Predicted Secondary structure 













.....
.












Query SS confidence 































. . . . .





.



































Query Sequence  PIDVHLMVKPVDRIVPDFAAAGASIITFHPEA. . . . . SEHVDR. TLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVIL
Query Conservation       
        
      


 
 
    .....      .        
    
 
   
  
           
 
Alig confidence 































.....





.



































Template Conservation 
  

 
      

 






  
 
  
 

  
 

   
  

  

 
   
 
     
   
          
Template Sequence  IASGLPKGDKLEWIIQKGTELGAHAFIPFQAARSVVKRERWTKIAKEAAEQSYRNEVPRVXDVHSFQQLLQRXQDFDKCV
Template Known Secondary structure 

STTTT



TT



TT
SS




B
GGGSS
Template Predicted Secondary structure 































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  LMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRS
Query Conservation        
             
  
            
   


           


 






  
 

      
  
Alig confidence 

.............
































































Template Conservation    ............. 
               
 
 







  

      

  



 



 


 
 


 
 
Template Sequence  VA. . . . . . . . . . . . . YESAFSAIVSSLPKGSSLLIVFGPEGGLTEAEVERLTEQDGVTCGLGPRILRTETAPLYALSAIS
Template Known Secondary structure  .............


T

TT


TT


TT



SS


TTT
Template Predicted Secondary structure  .............


























Template SS confidence 















































































   172. ......180.........190.........200.........210.........220.........230........
 
   218.220.
Predicted Secondary structure 
Query SS confidence 



Query Sequence  ELAK
Query Conservation   
  
Alig confidence 



Template Conservation     
Template Sequence  YQTE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   247..250
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions