Job Description P0AG07 Confidence 97.76% Date Thu Jan 5 11:27:45 GMT 2012 Rank 199 Aligned Residues 160 % Identity 18% Template c1telA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ribulose bisphosphate carboxylase, large subunit; PDBTitle: crystal structure of a rubisco-like protein from chlorobium2 tepidum Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		K	Q	Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence												.																										.	.	.	.	.	.	.	.															.																	.	.	.	.	.
Template Conservation												.																										.	.	.	.	.	.	.	.															.
Template Sequence		E	P	K	I	Y	L	A	N	I	T	.	D	E	V	D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	A	L	L	I	N	A	.	.	.	.	.	.	.	.	L	P	V	G	L	S	A	V	R	M	L	S	N	Y	.	T	Q	V	P	L	I	G	H	F	P	F	I	A	S	F	S	R	M	E	K	Y
Template Known Secondary structure		S										.			G	G	G												T									.	.	.	.	.	.	.	.													T	T	.		S	S							T	T	T						S	T	T	S
Template Predicted Secondary structure												.																										.	.	.	.	.	.	.	.															.
Template SS confidence
		1231	.	.	.	.	.	.	.	.	1240		.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.									.	.	.	.	1270	.	.	.	.	.	.	.	.	.		1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300
								77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q	S	F
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	H	S	K	V	M	T	K	L	Q	R	L	A	G	L	D	A	V	I	M	P	G	F	G	D	R	M	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T		S							S	S	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1301	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.		.	.	.	.	.		.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																									.	.	.																			.		.						.											.
Query SS confidence																									.	.	.																			.		.						.											.
Query Sequence		I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	.	.	.	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	.	G	.	A	D	M	F	V	.	A	G	S	A	I	F	D	Q	P	D	.	Y	K	K	V	I	D	E	M	R	S	E	L	A	K	V	S
Query Conservation																									.	.	.																			.		.						.											.
Alig confidence		.	.																						.	.	.																			.		.						.											.
Template Conservation		.	.
Template Sequence		.	.	T	P	E	E	E	V	L	E	N	V	I	E	C	T	K	P	M	G	R	I	K	P	C	L	P	V	P	G	G	S	D	S	A	L	T	L	Q	T	V	Y	E	K	V	G	N	V	D	F	G	F	V	P	G	R	G	V	F	G	H	P	M	G	P	K	A	G	A	K	S	I	R	Q	A	W	E	A	I	E
Template Known Secondary structure		.	.															S			T	T										S	S	B		T	T	T										S	S		S				B		S	S	S	S	S		T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.
		224
Predicted Secondary structure
Query SS confidence
Query Sequence		H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		1408

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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