Job Description P0AG07 Confidence 93.25% Date Thu Jan 5 11:27:45 GMT 2012 Rank 328 Aligned Residues 175 % Identity 16% Template c1gehE_ PDB info PDB header:lyase Chain: E: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase; PDBTitle: crystal structure of archaeal rubisco (ribulose 1,5-bisphosphate2 carboxylase/oxygenase) Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.																			.	.	.
Query SS confidence																																																											.	.																			.	.	.
Query Sequence		K	Q	Y	L	I	A	P	S	I	L	S	A	D	F	A	R	L	G	E	D	T	A	K	A	L	A	A	G	A	D	V	V	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	I	G	P	M	V	L	K	S	L	R	N	.	.	Y	G	I	T	A	P	I	D	V	H	L	M	V	K	P	V	D	R	.	.	.
Query Conservation																																																											.	.																			.	.	.
Alig confidence												.																										.	.	.	.	.	.	.	.														.	.																			.	.	.
Template Conservation												.																										.	.	.	.	.	.	.	.
Template Sequence		E	K	K	T	W	F	A	N	I	T	.	A	D	L	L	E	M	E	Q	R	L	E	V	L	A	D	L	G	L	K	H	A	M	V	D	V	.	.	.	.	.	.	.	.	V	I	T	G	W	G	A	L	R	Y	I	R	D	L	A	A	D	Y	G	L	A	I	H	G	H	R	A	M	H	A	A	F	T	R	N	P
Template Known Secondary structure		S							B			.	S	S															T									.	.	.	.	.	.	.	.																		T	T								T	T	T					S		T
Template Predicted Secondary structure												.																										.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.									.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
										77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	I	V	P	D	F	A	A	A	G	A	S	I	I	T	F	H	P	E	A	S	E	H	V	D	R	T	L	Q	L	I	K	E	N	G	C	K	A	G	L	V	F	N	P	A	T	P	L	S	Y	L	D	Y	V	M	D	K	L	D	V	I	L	L	M	S	V	N	P	G	F	G	G	Q
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Sequence		Y	H	G	I	S	M	F	V	L	A	K	L	Y	R	L	I	G	I	D	Q	L	H	V	G	T	A	E	G	G	K	W	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	Q	N	A	R	I	L	R	E	S	.	.	.	.	.	.	.	H	Y	K	P	D	E	N	D	V
Template Known Secondary structure		T	S															T		S									T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.																						.	.	.	.	.	330	.	.	.	.	.								.	.	.	.	340	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																													.											.							.
Query SS confidence																																													.											.							.
Query Sequence		S	F	I	P	Q	T	L	D	K	L	R	E	V	R	R	R	I	D	E	S	G	F	D	I	R	L	E	V	D	G	G	V	K	V	N	N	I	G	E	I	A	A	A	.	G	A	D	M	F	V	A	G	S	A	.	I	F	D	Q	P	D	.	Y	K	K	V	I	D	E	M	R	S	E	L	A	K	V	S	H
Query Conservation																																													.											.							.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																							.											.							.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	H	L	E	Q	K	F	Y	S	I	.	.	.	.	.	.	.	.	.	.	.	K	A	A	F	P	T	S	S	G	G	L	H	P	G	N	I	Q	P	V	I	E	A	L	G	T	D	I	V	L	Q	L	G	G	G	T	L	G	H	P	D	G	P	A	A	G	A	R	A	V	R	Q	A	I	D	A	I	M	Q
Template Known Secondary structure		S							T	T		.	.	.	.	.	.	.	.	.	.	.									S	S			T	T	T								T		S	S	S					S					S		T	T																	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.												360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions