Job Description P76000 Confidence 23.74% Date Thu Jan 5 12:17:10 GMT 2012 Rank 44 Aligned Residues 123 % Identity 8% Template d2gufa1 SCOP info Transmembrane beta-barrels Porins Ligand-gated protein channel Resolution 1.95

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	L	R	C	L	F	R	M	N	P	L	V	W	C	L	R	A	D	V	A	A	E	L	R	S	L	R	R	Y	Y	H	L	S	N	G	M	E	S	K	S	V	D	T	R	S	I	Y	R	E	L	G	A	T	L	S	Y	N	M	R	L	G	N	G	M	E	X	E	P	W	L	K	A	A	V	R	K	E	F	V
Query Conservation
Alig confidence													.	.	.																.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.																.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	A	T	A	N	F	D	T	G	P	.	.	.	L	T	H	T	V	S	Y	D	Y	V	D	A	R	N	A	.	.	.	.	I	T	D	T	P	L	L	R	R	A	K	Q	Q	V	K	Y	Q	L	D	W	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	F	D	W	G	I	T	Y	Q	Y	L
Template Known Secondary structure											T	T	.	.	.															T	.	.	.	.	T	T			B		T	T			S												.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure													.	.	.																.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		464	.	.	.	.	.	470	.	.	.	.				.	.	.	.	.	480	.	.	.	.	.	.	.	.	.					490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.														.	.	.	.	.	.	.	.	520	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	N	R	V	K	V	N	N	D	G	N	F	V	N	D	L	S	G	R	R	G	I	Y	Q	A	A	I	K	A	S	F	S	S	T	F	S	G	H	L	G	V	G	Y	S	H	G	A	G	V	E	S	P	W	N	A	V	A	G	V	N	W	S	F
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		G	T	R	Y	D	K	D	Y	S	S	Y	P	Y	Q	T	V	K	M	G	G	V	S	L	W	D	L	A	V	A	Y	P	V	T	S	H	L	T	V	R	G	K	I	A	N	L	F	D	K	D	Y	A	G	R	.	E	Y	T	L	S	G	S	Y	T	F
Template Known Secondary structure										S	S	S	S																				S	S	S	S									S	T	T								.
Template Predicted Secondary structure																																																							.
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.		.	.	.	580	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions