 |
Job Description | P76000 | Confidence | 95.31% | Date | Thu Jan 5 12:17:10 GMT 2012 |
Rank | 30 | Aligned Residues | 74 |
% Identity | 9% | Template | d1phoa_ |
SCOP info | Transmembrane beta-barrels
| Porins
| Porin
|
Resolution | 3.00 |
|
 |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | A | A | V | R | K | E | F | V | D | D | N | R | V | K | . |
. |
. |
. |
. |
V | N | N | D | G | N | F | V | N | D | L | S | G | R | R | G | I | Y | Q | A | A | I | K | A | S | F | S | S | T | F | S | G | H | L | G | V | G | Y | S | H | G | A | G | . |
. |
. |
. |
. |
V | E | S | P | W | N | A | V | A | G | V |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|   |   |   |   |   |
|   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
Template Sequence |   |
F | E | A | V | A | Q | Y | Q | F | D | F | G | L | R | P | S | L | G | Y | V | L | S | K | G | K | D | I | E | G | I | G | D | E | D | L | V | N | Y | I | D | V | G | A | T | Y | Y | F | N | K | N | M | S | A | F | V | D | Y | K | I | N | Q | L | D | S | D | N | K | L | N | I | N | N | D | D | I | V | A | V | G | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | B | T | T | T | B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S |  |  |  |  |  |  |  |  |  |  |
|
|
| S | S |
| T | T |
|
|
|
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . |
  |
  |   |
144 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
N | W | S | F |
Query Conservation |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|
|   |
|
Template Sequence |   |
T | Y | Q | F |
Template Known Secondary structure |   |
 |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
Template SS confidence |   |
|
|
|
|
  |   |
337 | . | . | 340 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|