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Job DescriptionP76000
Confidence99.93%DateThu Jan 5 12:17:10 GMT 2012
Rank3Aligned Residues143
% Identity8%Templatec2qomB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain.
Resolution2.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30......... 40.........50.........60.........70.........80
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Query Sequence  TIHLRCLFRMNPLVWCLRADVAAELRSLRRYYHLSNG. . MESKSVDTRSIYRELGATLSYNMRLGNGMEXEPWLKAAVRK
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Template Sequence  GAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAWKDGMHLSMKDKDYNPLIGRTGVDVGKSFS. . GKWKVTARAGLGYQF
Template Known Secondary structure 
TT

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   1152.......1160.........1170.........1180.........1190.........1200.........1210.... .....1220.........
 
   81........90... ......100.........110.........120.........130.........140.......
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Query Sequence  EFVDDNRVKVNND. . GNFVNDLSGRRGIYQAAIKASFSSTFSGHLGVGYSHGAGVESPWNAVAGVNWSF
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Template Sequence  DLLANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
Template Known Secondary structure  T
TTB


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   1232.......1240.........1250.........1260.........1270.........1280.........1290.........1300
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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