Job Description P76000 Confidence 12.28% Date Thu Jan 5 12:17:10 GMT 2012 Rank 50 Aligned Residues 80 % Identity 9% Template c2k4tA_ PDB info PDB header:membrane protein,apoptosis Chain: A: PDB Molecule:voltage-dependent anion-selective channel PDBTitle: solution structure of human vdac-1 in ldao micelles Resolution UNK

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	G	A	T	L	S	Y	N	M	R	L	G	N	G	M	E	X	E	P	W	L	K	A	A	V	R	K	E	F	V	D	D	N	R	V	K	V	N	N	D	G	N	F	V	N	D	L	S	G	R	R	G	I	Y	Q	A	A	I	K	A	S	F	S	S	T	F	S	G	H	L	G	V	G	Y	S	H	G	A	G
Query Conservation
Alig confidence															.	.	.	.	.																				.	.	.	.						.	.	.	.	.
Template Conservation															.	.	.	.	.																				.	.	.	.						.	.	.	.	.
Template Sequence		E	T	A	V	N	L	A	W	T	A	G	N	S	.	.	.	.	.	N	T	R	F	G	I	A	A	K	Y	Q	I	D	P	D	A	C	F	S	.	.	.	.	A	K	V	N	N	.	.	.	.	.	S	S	L	I	G	L	G	Y	T	Q	T	L	K	P	G	I	K	L	T	L	S	A	L	L	D	G	K	N	V
Template Known Secondary structure											T	T	S	S	.	.	.	.	.														T	T					.	.	.	.					S	.	.	.	.	.	S	S											S	S	S										S	T	T		G
Template Predicted Secondary structure															.	.	.	.	.																				.	.	.	.						.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	S	P	W	N	A	V	A	G	V	N	W	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	G	G	H	K	L	G	L	G	L	E	F	Q
Template Known Secondary structure		G	G	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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