Return to main results Retrieve Phyre Job Id

Job DescriptionP76000
Confidence38.01%DateThu Jan 5 12:17:10 GMT 2012
Rank40Aligned Residues129
% Identity11%Templatec2grxB_
PDB info PDB header:metal transportChain: B: PDB Molecule:ferrichrome-iron receptor; PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 


















Query SS confidence 















































































Query Sequence  IHLRCLFRMNPLVWCLRADVAAELRSLRRYYHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEXEPWLKAAVRKEFV
Query Conservation        
 
     
 
 
 
       
  
  


 
      

 



 
              

      


 
Alig confidence 














..



























....






























Template Conservation   
             ..    
             
  
   
  ....       
                 
     
Template Sequence  VEIEAKAALSASVNV. . VGSYTYTDAEYTTDTTYKGNTPAQVPKH. . . . MASLWADYTFFDGPLSGLTLGTGGRYTGSSY
Template Known Secondary structure 

SSS..
TTTTT


TT

S....

SSTTTT


Template Predicted Secondary structure 


..














....






Template SS confidence 















































































   581........590..... ....600.........610.........620... ......630.........640.........650....
 
   84.....90.........100.........110....... ..120.........130....... ..140.......
Predicted Secondary structure 

















....







............
Query SS confidence 

































. . . .



















. . . . . . . . . . . .









Query Sequence  DDNRVKVNNDGNFVNDLSGRRGIYQAAIKASFSS. . . . TFSGHLGVGYSHGAGVESPW. . . . . . . . . . . . NAVAGVNWSF
Query Conservation      
                     

   
  ....  

        
       ............   

 

 
Alig confidence 



.........




















....



















............









Template Conservation      .........       
   
    
           
 
 
 

 
  
              

       
 
Template Sequence  GDPA. . . . . . . . . NSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF
Template Known Secondary structure  SSTT.........

S

GGGGT
SS
STT



SSTT






Template Predicted Secondary structure 


.........
























Template SS confidence 















































































   655... .660.........670.........680.........690.........700.........710.........720.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions