|   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | |
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
T | S | P | V | V | P | V | T | T | P | G | T | K | P | D | L | N | A | S | F | V | S | A | N | A | E | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | Y | Q | Y | Q | P | . |
T | E | I | I | L | S | E | G | R | L | V | D | S | Q | G | Y | G | V | A | G | V | N | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|   |   |   |   |
|   |
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|
| . |
|   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |
|   |
|   |
|   |   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |
Template Sequence |   |
S | P | K | N | A | L | I | S | I | A | E | T | L | S | E | V | T | A | P | H | F | S | A | D | K | F | G | P | K | D | N | D | L | I | L | N | Y | A | K | D | G | L | P | I | G | E | R | V | I | V | H | G | Y | V | R | D | Q | F | G | R | P | V | K | N | A | L | V | E | V | W | Q | A | N | A | S | G | R | Y | R | H |
Template Known Secondary structure |   |
S |
| S | S |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
| G | G | G | S |
| T | T | T | T | B | T | T | T | T | T |
| S | S | S |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | T | S |
| B |
|
| S |
|  |  |  |  |  |
|
|
| T | T | S |
|
| S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
331 | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
293 | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | T | N | S | G | R | G | V | T | G | E | N | G | E | F | S | F |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|
|   |   |   |
|   |
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |
|   |
|   |
|
Template Sequence |   |
P | N | D | Q | Y | I | G | A | M | D | P | N | F | G | G | C | G | R | M | L | T | D | D | N | G | Y | Y | V | F |
Template Known Secondary structure |   |
T | T |
|
|
| S | S |
|
|
| T | T |
|
|
|  |  |  |  |  |
|
| T | T | S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
411 | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . |
  |