 |
Job Description | P0CK95 | Confidence | 48.15% | Date | Wed Jan 25 15:20:37 GMT 2012 |
Rank | 24 | Aligned Residues | 66 |
% Identity | 20% | Template | c3nqxA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:secreted metalloprotease mcp02; |
PDBTitle: crystal structure of vibriolysin mcp-02 mature enzyme, a zinc2 metalloprotease from m4 family
|
Resolution | 1.70 Å |
|
 |
  |   |
1227 | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 | . | . | . | . | . | . | . | . | . | 1260 | . | . | . | . | . | . | . | . | . | 1270 | . | . | . | . | . | . | . | . | . | 1280 | . | . | . | . | . | . | . | . | . | 1290 | . | . | . | . | . | . | . | . | . | 1300 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | T | F | A | S | S | M | N | D | F | Y | G | R | D | S | E | D | G | K | H | R | M | F | T | Y | K | N | L | P | G | H | K | H | R | F | T | N | D | V | Q | I | S | I | G | D | A | H | S | G | Y | P | V | M | N | S | S | F | S | P | N | S | T | T | L | P | T | T | P | L | N | D | W | L | I | W | H | E | V | G |
Query Conservation |   |
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |
|
|   |   |   |
|   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
|
|   |
|   |
|   |   |
|
|   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   | . |   |
|
|
|
|   |   |   |   |
|
|
|
|
|
|   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |
|
Template Sequence |   |
G | N | V | I | F | N | M | Y | N | D | W | L | G | T | A | P | L | S | F | Q | L | Q | M | . |
R | V | H | Y | S | S | N | Y | E | N | A | F | W | D | G | S | A | M | T | F | G | D | G | Q | N | T | F | Y | P | L | V | S | L | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | S | A | H | E | V | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | S | S |
| S | S | S | S |
|  |  |  | . |  |  |  |  | S | S | S |
|
|
|  |  |  |
| S | S |
|  |  |  |  |
|
|
| S | S | B | S |
| S |
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  | . |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
285 | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | |
. | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . |
  |
  |   |
1307 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
H | N |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
|
|
Template Sequence |   |
H | G |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
349 | 350 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|