Job Description P0CK95 Confidence 85.57% Date Wed Jan 25 15:20:37 GMT 2012 Rank 2 Aligned Residues 209 % Identity 12% Template c3ebhA_ PDB info PDB header:hydrolase inhibitor Chain: A: PDB Molecule:m1 family aminopeptidase; PDBTitle: structure of the m1 alanylaminopeptidase from malaria complexed with2 bestatin Resolution 1.65 Å

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		1215	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.		.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		N	Y	T	G	G	L	E	Q	F	A	N	D	L	D	T	F	A	S	S	M	N	D	F	Y	G	R	D	S	E	D	G	K	H	R	M	F	T	Y	K	N	L	P	G	H	K	H	R	F	T	N	D	V	Q	I	S	I	G	D	A	.	H	S	G	Y	P	V	M	N	S	S	F	S	P	N	S	T	T	L	P	T
Query Conservation																																																													.
Alig confidence																													.	.	.	.	.	.	.	.																.	.	.	.	.					.
Template Conservation																													.	.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		K	Y	V	S	K	L	Q	W	A	L	E	C	L	K	K	S	M	A	F	D	E	D	Y	F	G	L	E	.	.	.	.	.	.	.	.	Y	D	L	S	R	L	N	L	V	A	V	S	D	F	N	.	.	.	.	.	V	G	A	M	E	N	K	G	L	N	I	F	N	A	N	S	L	L	A	S	K	K	N	S	I
Template Known Secondary structure		G	G	G	G	G	G																						.	.	.	.	.	.	.	.			S	S								S			S	.	.	.	.	.	S	S					T	T						G	G	G	T				T	T	T	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.									.	.	.	.	.	.	450	.	.	.	.	.	.	.	.						.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		1294	.	.	.	.	.				1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.		.	.	.	.	.	.	1330	.	.	.	.	.	.									.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.
Predicted Secondary structure								.	.	.																									.														.	.	.	.	.	.	.	.
Query SS confidence								.	.	.																									.														.	.	.	.	.	.	.	.
Query Sequence		T	P	L	N	D	W	.	.	.	L	I	W	H	E	V	G	H	N	A	A	E	T	P	L	T	V	P	G	A	T	E	V	A	.	N	N	V	L	A	L	Y	M	Q	D	R	Y	L	.	.	.	.	.	.	.	.	G	K	M	N	R	V	A	D	D	I	T	V	A	P	E	Y	L	E	E	S	N	N	Q	A	W
Query Conservation								.	.	.																									.														.	.	.	.	.	.	.	.
Alig confidence								.	.	.																									.														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	S	Y	A	R	I	L	T	V	V	G	H	E	Y	F	H	Q	Y	T	G	N	R	V	T	L	R	D	W	F	Q	L	T	L	K	E	G	L	T	V	H	R	E	N	L	F	S	E	E	M	T	K	T	V	T	T	R	L	S	H	V	D	L	L	R	S	V	Q	F	L	E	D	S	S	P	L	S	H	P	I
Template Known Secondary structure		T																T	T	T	B	T	T	T	B			S	S	G	G	G																							T																			T	S	T	T				S
Template Predicted Secondary structure
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
		1362	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.		1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		A	R	G	G	A	G	D	R	L	L	M	Y	A	Q	L	K	E	W	A	E	K	N	F	D	I	K	K	W	Y	P	D	G	T	P	L	P	E	F	Y	S	E	R	E	G	M	K	G	W	.	N	L	F	Q	L	M	H	R	K	A	R	G	D	E	V	S	N	D	K	F	G	G	K	N	Y	C	A	E	S	N	G
Query Conservation																																																		.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.				.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	E	S	Y	V	S	M	E	N	F	Y	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	D	K	G	S	E	V	M	R	M	Y	L	T	I	.	.	.	L	G	E	E	Y	Y	K	K	G	F	D	I	Y	I	K	K	N	D	G	N	T	A	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S		S			S		G	G	G						.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																		T	T	S				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.													.	580	.	.	.	.	.	.	.	.	.	590	.	.	.				.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
		1441	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.							.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		N	A	A	D	T	L	M	L	C	A	S	W	V	A	Q	T	D	L	S	E	F	.	.	.	.	.	.	F	K	K	W
Query Conservation																							.	.	.	.	.	.
Alig confidence		.	.																				.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	C	E	D	F	N	Y	A	M	E	Q	A	Y	K	M	K	K	A	D	N	S	A	N	L	N	Q	Y	L	L	W
Template Known Secondary structure		.	.																	T		T	T				T	G	G	G
Template Predicted Secondary structure		.	.
Template SS confidence
				617	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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