Job Description P0CK95 Confidence 30.78% Date Wed Jan 25 15:20:37 GMT 2012 Rank 49 Aligned Residues 127 % Identity 22% Template c1xi4D_ PDB info PDB header:endocytosis/exocytosis Chain: D: PDB Molecule:clathrin heavy chain; PDBTitle: clathrin d6 coat Resolution 7.90 Å

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		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.				.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		K	F	H	V	F	H	D	S	T	N	F	Y	G	S	T	G	N	A	R	G	Q	A	V	V	N	I	S	N	.	.	.	A	A	F	P	I	L	M	A	R	N	D	K	N	Y	W	L	A	F	G	E	K	R	A	W	D	K	N	E	L	A	Y	I	T	E	A	P	S	L	V	E	P	E	N	V	T	R	D	T	A
Query Conservation																														.	.	.
Alig confidence																														.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	H	I	I	E	V	G	T	P	P	T	G	N	Q	P	F	P	K	K	A	V	D	V	F	F	P	P	E	A	Q	N	D	F	P	V	A	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	S	E	K	H	D	V	V	F	L	I	T	K	Y	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							B		S				T	T															T	T	S		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T								T	T	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.															.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.			.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		T	F	N	L	P	F	I	S	L	G	Q	V	G	E	G	K	L	M	V	I	G	N	P	H	Y	N	S	I	L	R	C	P	N	G	Y	S	W	N	G	.	.	G	V	N	K	D	G	Q	C	T	L	N	S	D	P	D	D	M	K	N	F	M	E	N	V	L	R	Y	L	S	D	D	K	W	K	P	D	A	K	A
Query Conservation																																									.	.
Alig confidence		.	.	.	.	.																																			.	.																	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																					.	.	.	.	.	.
Template Sequence		.	.	.	.	.	Y	I	H	L	Y	D	L	E	T	G	T	C	I	Y	M	N	R	I	S	G	E	T	I	F	V	T	A	P	H	E	A	T	A	G	I	I	G	V	N	R	K	G	Q	V	L	S	V	C	V	E	E	E	.	.	.	.	.	.	N	I	I	P	Y	I	T	N	V	L	Q	N	P	D	L	A	L
Template Known Secondary structure		.	.	.	.	.							T	T	S											S	S									T	T	T	T							T	T												.	.	.	.	.	.								T	T	S
Template Predicted Secondary structure		.	.	.	.	.																																																					.	.	.	.	.	.
Template SS confidence
							281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.							.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		623	.	.	.	.	.	.	630	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	T	V	G	T	N	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	A	V	R	N	N	L	A
Template Known Secondary structure							S			S
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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