Job Description P0A8K1 Confidence 12.34% Date Thu Jan 5 11:08:01 GMT 2012 Rank 72 Aligned Residues 50 % Identity 32% Template d1s6na_ SCOP info Immunoglobulin-like beta-sandwich E set domains Class II viral fusion proteins C-terminal domain Resolution UNK

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																			.
Query SS confidence																		.	.																			.
Query Sequence		G	D	L	F	S	V	N	H	L	T	A	Q	N	V	P	N	.	.	L	F	A	R	N	E	R	V	I	C	L	F	D	T	E	F	G	P	.	M	A	Q	I	L	V	G	A	T	I	V	G	S	I	E	T	V	W	A	G	T	I	T	P	P	R	E	G	I	I	K	R	W	T	W	P	A	G	E	N	D	G	S
Query Conservation																		.	.																			.
Alig confidence										.	.	.	.	.	.	.		.	.																			.											.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.																																	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	L	V	T	V	N	P	.	.	.	.	.	.	.	F	V	S	V	A	T	A	N	A	K	V	L	I	E	L	E	P	P	F	G	D	S	Y	I	V	V	G	R	G	E	Q	Q	.	.	.	I	N	H	H	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S			S	S	S		S	.	.	.	.	.	.	.		B			T	T			S										S										T	T			.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.																																	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.								70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	L	K	G	Q	E	M	G
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	H	K	S	G	S	S	I	G
Template Known Secondary structure		.	.			S	S		T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				107	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions