 |
Job Description | P0A8K1 | Confidence | 8.79% | Date | Thu Jan 5 11:08:01 GMT 2012 |
Rank | 91 | Aligned Residues | 67 |
% Identity | 16% | Template | c3n6rK_ |
PDB info |
PDB header:ligase | Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit; |
PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
|
Resolution | 3.20 Å |
|
 |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | R | P | I | D | T | D | P | N | V | L | V | M | P | A | D | G | V | I | S | Q | L | G | K | I | E | E | D | K | I | L | Q | A | K | G | H | N | Y | S | L | E | A | L | L | A | G | N | Y | L | M | A | D | L | F | R | N | G | T | F | V | T | T | Y | L | S | P | R | D | Y | H | R | V | H | M | P | C | N | G | I |
Query Conservation |   |
  |   |
|
|
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|
|   |   |
|
|
|   |   |
|
|
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|
|
|   |
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|
|   |
| . |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|
|
|   |
|   |
|
|
|
|
|
|
|
|   |   |
|   |
|
|   |   |
|   |
Template Sequence |   |
P | E | K | L | P | P | D | T | S | K | M | L | L | C | P | M | P | G | L | I | V | K | V | . |
D | V | E | V | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | E | V | Q | E | G | Q | A | L | C | T | I | E | A | M | K | M | E | N | I | L | R | A | E | K | K | G | V |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
|
| S |  |  |  |
|
| S | S |  |  |  |  |  |  | . |
|
|
| T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |
| T | T |
|  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |
| S | S | S |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  | . |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
651 | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | |
. | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . |
  |
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | E | M | I | Y | V | P | G | D | L |
Query Conservation |   |
|   |   |   |   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |   |
|   |   |
Template Sequence |   |
V | A | K | I | N | A | S | A | G | N | S |
Template Known Secondary structure |   |
 |  |  |  |
|
|
| T | T |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
707 | . | . | 710 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|