 |
Job Description | P0A8K1 | Confidence | 25.27% | Date | Thu Jan 5 11:08:01 GMT 2012 |
Rank | 47 | Aligned Residues | 48 |
% Identity | 25% | Template | c3egpA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:envelope protein; |
PDBTitle: crystal structure analysis of dengue-1 envelope protein2 domain iii
|
Resolution | 2.40 Å |
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | P | G | D | L | F | S | V | N | H | L | T | A | Q | N | V | P | N | L | F | A | R | N | E | R | V | I | C | L | F | D | T | E | F | G | P | M | A | Q | I | L | V | G | A | T | I | V | G | S | I | E | T | V | W | A | G | T |
Query Conservation |   |
|
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|   |   |   |   |
|   |   |
|   |
|
|   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|   |
|
| . | . | . | . | . | . | . |
|
|   |   |   |
|   |   |
|   |
|
|   |
|
|
|
|
| . |
|
|   |
|   |
|
|   |
|   | . |   |   |
|   |   |   |
|   |
|
|
Template Sequence |   |
Q | N | G | R | L | I | T | A | N | P | . |
. |
. |
. |
. |
. |
. |
I | V | T | D | K | E | K | P | V | N | I | E | A | E | P | P | F | G | . |
E | S | Y | I | V | V | G | A | G | E | . |
K | A | L | K | L | S | W | F | K | K |
Template Known Secondary structure |   |
|
| S |  |  |
| S | S | S |
| . | . | . | . | . | . | . |  |  | S |
| T | T | S |
|  |  |  |  |  |  |
|
| S |  | . |  |  |  |  |  |  | S | S | S | S | . | S |
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
347 | . | . | 350 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | |
. | . | . | . | . | 380 | . | . | . | . | |
. | . | . | . | . | 390 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|