Job Description P0A8K1 Confidence 83.48% Date Thu Jan 5 11:08:01 GMT 2012 Rank 16 Aligned Residues 75 % Identity 19% Template c2qikA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0131 protein ykqa; PDBTitle: crystal structure of ykqa from bacillus subtilis. northeast2 structural genomics target sr631 Resolution 1.35 Å

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		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	P	G	D	L	F	S	V	N	H	L	T	A	Q	N	V	P	N	L	F	A	R	N	E	R	V	I	C	L	F	D	T	E	F	G	P	M	A	Q	I	L	V	G	A	T	I	V	G	S	I	E	T	V	W	A	G	T	I	T	P	P	R	E	G	I	I	K	R	W	T	W	P	A	G	E	N	D	G	S
Query Conservation
Alig confidence																																									.												.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation																																									.												.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Sequence		Y	I	Y	G	E	V	Y	E	A	D	E	L	C	I	H	K	L	D	Q	F	F	Q	G	Y	H	K	Q	T	V	F	V	E	T	D	V	G	I	K	I	.	A	L	I	Y	F	X	N	F	T	K	I	.	.	.	.	.	.	.	.	.	.	.	S	S	G	D	W	K	E	H	Q	X	I	.	.	.	.	.	.	.
Template Known Secondary structure																						S	T	T											T	T					.												.	.	.	.	.	.	.	.	.	.	.	T	T	S									.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.												.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.												.	.	.	.	110	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	L	K	G	Q	E	M	G	R	F	K	L	G	S
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	S	K	S	K	N	P	I	Y	Y	F	A	Y	G	S
Template Known Secondary structure		.	.		T	T		S	S							S	G
Template Predicted Secondary structure		.	.
Template SS confidence
				123	.	.	.	.	.	.	130	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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