Job Description P0A8K1 Confidence 59.46% Date Thu Jan 5 11:08:01 GMT 2012 Rank 26 Aligned Residues 47 % Identity 34% Template c1urzC_ PDB info PDB header:virus/viral protein Chain: C: PDB Molecule:envelope protein; PDBTitle: low ph induced, membrane fusion conformation of the2 envelope protein of tick-borne encephalitis virus Resolution 2.7 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	L	F	S	V	N	H	L	T	A	Q	N	V	P	N	L	F	A	R	N	E	R	V	I	C	L	F	D	T	E	F	G	P	M	A	Q	I	L	V	G	A	T	I	V	G	S	I	E	T	V	W	A	G	T	I	T	P	P	R	E	G	I	I	K	R	W	T	W	P	A	G	E	N	D	G	S	V	A	L
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.																		.								.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.																		.								.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	M	L	I	T	P	N	P	.	.	.	.	.	.	.	.	T	I	E	N	N	G	G	G	F	I	E	M	Q	L	P	P	G	.	D	N	I	I	Y	V	G	.	.	.	.	.	E	L	S	H	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F
Template Known Secondary structure					S	S	S	S		.	.	.	.	.	.	.	.				S	S		B									S		.							T	.	.	.	.	.	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																		.								.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		355	.	.	.	.	360	.	.									.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.						.	.	.	390	.	.																												.
		242	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	G	Q	E	M	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	G	S	S	I	G	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions