Job Description P0A6L7 Confidence 88.06% Date Thu Jan 5 11:03:27 GMT 2012 Rank 5 Aligned Residues 164 % Identity 13% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	P	G	A	Q	Y	P	E	R	I	I	Q	F	G	E	G	N	F	L	R	A	F	V	D	W	Q	I	D	L	L	N	E	H	T	D	L	N	S	G	V	V	V	V	R	P	I	E	T	S	F	P	P	S	L	S	T	Q	D	G	L	Y	T	T	I	I	R	G	L	N	E	K	G	E	A	V	S	D	A	R
Query Conservation
Alig confidence																								.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		N	T	K	K	I	L	F	K	N	R	F	V	I	L	G	F	G	C	V	G	Q	A	.	.	.	.	L	X	P	L	I	F	E	K	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	V	A	Q	Q	Y	G	V	S	F	K	L	Q	Q	I	T	P	Q	N	Y	L	E	V	I	G	S	T	L
Template Known Secondary structure			T	T		B				S								S						.	.	.	.									B				G	G	G						S	S			S								T										T	T	T					T	G	G	G
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	I	R	S	V	N	R	E	I	S	V	Y	S	E	Y	D	E	F	L	K	L	A	H	N	P	E	M	R	F	V	F	S	N	T	T	E	A	G	I	S	Y	H	A	G	D	K	F	D	D	A	P	A	V	S	Y	P	A	K	L	T	R	L	L	F	E	R	F	S	H	F	N	G	A	L	D	K	G	W	I	.
Query Conservation																																																																																	.
Alig confidence																																			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.											.
Template Conservation																																			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		E	E	N	D	F	L	I	D	V	S	I	G	I	S	S	L	A	L	I	I	L	C	N	Q	K	G	A	L	Y	I	N	A	A	.	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	W	K	E	R	R	T	N	Y	S	L	R	E	E	V	.	.	L	R	L	K	D	K	T	Q	K	T	A
Template Known Secondary structure			T	T								S	S	S													T						S	S	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.		T	T	T	T	T			S
Template Predicted Secondary structure																																			.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.																	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.
		167	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		I	I	P	C	E	L	I	D	Y	.	N	G	D	A	L	R	E	L	V	L	R	Y	A	Q	E	W	A	L	P
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		L	I	T	H	G	A	N	P	G	L	V	S	H	F	I	K	E	A	L	L	N	I	A	K	D	N	G	L	T
Template Known Secondary structure				S		B	T	T	T	B																T	T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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