Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6L7
Confidence66.65%DateThu Jan 5 11:03:27 GMT 2012
Rank10Aligned Residues73
% Identity21%Templatec2axqA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:saccharopine dehydrogenase; PDBTitle: apo histidine-tagged saccharopine dehydrogenase (l-glu2 forming) from saccharomyces cerevisiae
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70.........80.........90......
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  RIIQFGEGNFLRAFVDWQIDLLNEHTDLNSGVVVVRPIETSFPPSLSTQDGLYTTIIRGLNEKGEAVSDARLIRSVNREI
Query Conservation   




 


 

  
     
        


 
          
  






   
    
       

 

    
Alig confidence 
























.......


















.







....................
Template Conservation 

 




  
      
       .......
 

 
             .      
 ....................
Template Sequence  NVLLLGSGFVAQPVIDTLAANDDIN. . . . . . . VTVACRTLANAQALAKPSG. SKAISLDV. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

STTTSTT.......SSGGGT.


T....................
Template Predicted Secondary structure 






.......



.


....................
Template SS confidence 















































































   4.....10.........20........ .30.........40....... ..50.....
 
   97..100.........110.........120..
Predicted Secondary structure 









Query SS confidence 

























Query Sequence  SVYSEYDEFLKLAHNPEMRFVFSNTT
Query Conservation      
          
   


 


Alig confidence  ...













..






Template Conservation  ...     
       
..


   
Template Sequence  . . . TDDSALDKVLADND. . VVISLIP
Template Known Secondary structure  ...T
TSS..
S
Template Predicted Secondary structure  ...





..


Template SS confidence 

























   56...60......... 70......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions