Job Description P66948 Confidence 98.88% Date Thu Jan 5 12:10:22 GMT 2012 Rank 81 Aligned Residues 198 % Identity 12% Template d1qqea_ SCOP info alpha-alpha superhelix TPR-like Tetratricopeptide repeat (TPR) Resolution 2.90

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		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.								.	.
Predicted Secondary structure																																			.	.	.	.																																			.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.																																			.	.	.	.	.	.	.
Query Sequence		L	A	K	A	R	T	L	G	M	Y	N	S	G	R	N	Q	L	T	S	D	L	L	D	E	W	A	K	G	N	V	R	Q	Q	.	.	.	.	R	A	A	Q	Y	G	R	A	L	Q	A	M	E	A	N	K	Y	D	E	A	R	K	T	L	Q	P	L	L	A	A	E	P	G	N	.	.	.	.	.	.	.	A	W
Query Conservation																																			.	.	.	.																																			.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	V	Q	A	A	T	I	Y	R	L	R	K	E	L	N	L	A	G	D	S	F	L	K	A	A	D	Y	Q	K	K	A	G	N	E	D	E	A	G	N	T	Y	V	E	A	Y	K	C	F	K	S	G	G	N	S	V	N	A	V	D	S	L	E	N	A	I	Q	I	F	T	H	R	G	Q	F	R	R	G	A	N	F
Template Known Secondary structure												T	T		T																	T	T																			T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.								.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.
Query Sequence		Y	L	D	L	A	T	D	I	D	L	G	Q	N	K	A	N	E	A	I	N	R	L	K	N	A	R	D	L	.	.	.	.	.	.	.	R	T	N	P	V	L	Q	L	N	L	A	N	A	Y	L	Q	G	G	Q	P	Q	E	A	A	N	I	L	N	R	Y	T	F	N	N	K	D	D	S	N	G	W	D	L	L	A
Query Conservation																														.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	E	L	G	E	I	L	E	N	D	L	H	D	Y	A	K	A	I	D	C	Y	E	L	A	G	E	W	Y	A	Q	D	Q	S	V	A	L	S	N	K	C	F	I	K	C	A	D	L	K	A	L	D	G	Q	Y	I	E	A	S	D	I	Y	S	K	L	I	K	S	S	M	G	N	R	L	S	Q	W	S	L	K
Template Known Secondary structure												T	T																				T	T																			T	T															T	T	S	S		T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.																					430	.	.	.	.	.	.	.	.	.			440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		Q	A	E	A	A	L	N	N	R	D	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	R	A	E	G	Y	A	L	.	.	A	G	R	L	D	Q	A	I	S	L	L	S	S	A	S	S	Q	V	K	L	G	S	L	Q	Q	A	R	Y	D	A	R	I	D	Q
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		D	Y	F	L	K	K	G	L	C	Q	L	A	A	T	D	A	V	A	A	A	R	T	L	Q	E	G	Q	S	E	S	N	F	L	K	S	L	I	D	A	V	N	E	G	D	S	E	Q	L	S	E	H	C	K	E	F	D	N	F	M	R	L	D	K	W	K	I	T	I	L	N	K	I	K	E	S	I	Q	Q
Template Known Secondary structure														T	T											G	G	G															T	T		T	T	T									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions