Job Description P66948 Confidence 98.57% Date Thu Jan 5 12:10:22 GMT 2012 Rank 94 Aligned Residues 172 % Identity 16% Template c3sf4B_ PDB info PDB header:signaling protein/protein binding Chain: B: PDB Molecule:g-protein-signaling modulator 2; PDBTitle: crystal structure of the complex between the conserved cell polarity2 proteins inscuteable and lgn Resolution 2.60 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.					.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.								.	.	.	.	380	.	.	.
Predicted Secondary structure																																.	.	.	.																																.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.																																.	.	.	.	.	.	.
Query Sequence		R	A	L	Q	A	M	E	A	N	K	Y	D	E	A	R	K	T	L	Q	P	L	L	A	A	E	P	G	N	A	W	.	.	.	.	Y	L	D	L	A	T	D	I	D	L	G	Q	N	K	A	N	E	A	I	N	R	L	K	N	A	R	D	L	R	T	N	.	.	.	.	.	.	.	P	V	L	Q	L	N	L	A
Query Conservation																																.	.	.	.																																.	.	.	.	.	.	.
Alig confidence																																.	.	.	.																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	E	R	L	C	K	S	G	D	C	R	A	G	V	S	F	F	E	A	A	V	Q	V	G	T	E	D	L	K	T	L	S	A	I	Y	S	Q	L	G	N	A	Y	F	Y	L	H	D	Y	A	K	A	L	E	Y	H	H	H	D	L	T	L	A	R	T	I	G	D	Q	L	G	E	A	K	A	S	G	N	L	G
Template Known Secondary structure								T	T	T																		S																			T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	Y	L	Q	G	G	Q	P	Q	E	A	A	N	I	L	N	R	Y	T	F	N	N	K	D	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	L	K	V	L	G	N	F	D	E	A	I	V	C	C	Q	R	H	L	D	I	S	R	E	L	N	D	K	V	G	E	A	R	A	L	Y	N	L	G	N	V	Y	H	A	K	G	K	S	F	G	V	G	E	F	P	E	E	V	R	D	A	L	Q	A	A	V	D	F	Y	E	E	N	L	S	L	V	T	A	L
Template Known Secondary structure								T																			T	T																							T																														T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
									411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	N	G	W	D	L	L	A	Q	A	E	A	A	L	N	N	R	D	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	R	A	A	Q	G	R	A	F	G	N	L	G	N	T	H	Y	L	L	G	N	F	R	D	A	V	I	A	H	E	Q	R	L	L	I	A	K	E	F	G	D	K	A	A	E	R	R	A	Y	S	N	L	G	N	A	Y	I	F	L	G	E	F	E	T	A	S	E	Y	Y	K	K	T	L	L	L	A	R	Q	L
Template Known Secondary structure		T																				T																			T	T																		T	T	T																			T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
											430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.							.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	L	A	A	R	A	E	G	Y	A	L	A	G	R	L	D	Q	A	I	S	L	L	S	S	A	S	S	Q	.	.	.	.	.	.	V	K	L	G	S	L	Q	Q	A	R	Y	D	A	R	I	D	Q	L	R	Q	L	Q	E	R	F	K	P	Y	T	K
Query Conservation		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	R	A	V	E	A	Q	S	C	Y	S	L	G	N	T	Y	T	L	L	Q	D	Y	E	K	A	I	D	Y	H	L	K	H	L	A	I	A	Q	E	L	N	D	R	I	G	E	G	R	A	C	W	S	L	G	N	A	Y	T	A	L	G	N	H	D	Q	A	M	H	F	A	E	K
Template Known Secondary structure		T																			T	T																			T	T																				T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions