 |
Job Description | P66948 | Confidence | 80.86% | Date | Thu Jan 5 12:10:22 GMT 2012 |
Rank | 156 | Aligned Residues | 70 |
% Identity | 17% | Template | c3se6A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 2; |
PDBTitle: crystal structure of the human endoplasmic reticulum aminopeptidase 2
|
Resolution | 3.08 Å |
|
 |
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
. | 90 | . | . | . | |
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|
| . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | T | Q | Y | I | N | S | L | G | M | R | L | V | S | H | A | N | . |
S | V | K | T | P | . |
F | H | F | F | L | I | N | N | D | E | I | N | A | F | A | F | F | G | G | N | V | V | L | H | S | A | L | F | . |
. |
. |
. |
. |
R | Y | S | D | N | E | S | Q | L | A | S | V | M | A | H | E | I | S | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |
|   |
|   |   |
|
|   | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |   |
|   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
Template Sequence |   |
Y | A | L | Q | A | S | L | K | L | L | D | F | Y | E | K | Y | F | D | I | Y | Y | P | L | S | K | L | D | L | I | A | I | P | D | F | A | P | G | A | M | E | N | W | G | L | I | T | Y | R | E | T | S | L | L | F | D | P | K | T | S | S | A | S | D | K | L | W | V | T | R | V | I | A | H | E | L | A | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
| S | S |  |  |  |  |  |  |  | S | S |
| S | S | S |  |  |
|
| T | T |  |  |  |  |  | G | G | G | T |
|
|
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
298 | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|