Job Description P66948 Confidence 89.52% Date Thu Jan 5 12:10:22 GMT 2012 Rank 120 Aligned Residues 70 % Identity 19% Template c3qnfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 1; PDBTitle: crystal structure of the open state of human endoplasmic reticulum2 aminopeptidase 1 erap1 Resolution 3.00 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																				.						.																													.	.	.	.	.
Query SS confidence																				.						.																													.	.	.	.	.
Query Sequence		L	L	T	Q	Y	I	N	S	L	G	M	R	L	V	S	H	A	N	.	S	V	K	T	P	.	F	H	F	F	L	I	N	N	D	E	I	N	A	F	A	F	F	G	G	N	V	V	L	H	S	A	L	F	.	.	.	.	.	R	Y	S	D	N	E	S	Q	L	A	S	V	M	A	H	E	I	S	H
Query Conservation																				.						.																													.	.	.	.	.
Alig confidence																				.						.																													.	.	.	.	.
Template Conservation
Template Sequence		Y	A	L	D	A	A	V	T	L	L	E	F	Y	E	D	Y	F	S	I	P	Y	P	L	P	K	Q	D	L	A	A	I	P	D	F	Q	S	G	A	M	E	N	W	G	L	T	T	Y	R	E	S	A	L	L	F	D	A	E	K	S	S	A	S	S	K	L	G	I	T	M	T	V	A	H	E	L	A	H
Template Known Secondary structure																			T	S			S	S	S								T	T			S	S					T	T						G	G	G	T				T	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions