Job Description P66948 Confidence 99.60% Date Thu Jan 5 12:10:22 GMT 2012 Rank 17 Aligned Residues 206 % Identity 14% Template c3mv3B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:coatomer subunit epsilon; PDBTitle: crystal structure of a-cop in complex with e-cop Resolution 3.25 Å

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		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		M	V	V	Q	S	S	E	D	F	Y	L	A	K	A	R	T	L	G	M	Y	N	S	G	R	N	Q	L	T	S	D	L	L	D	E	W	A	K	G	N	V	R	Q	Q	R	A	A	Q	Y	G	R	A	L	Q	A	M	E	A	N	K	Y	D	E	A	R	K	T	L	Q	P	L	L	A	A	E	P	G	N	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																							.																																																								.	.	.
Template Conservation																							.
Template Sequence		K	D	K	Q	N	S	P	Y	E	L	Y	L	L	A	T	A	Q	A	I	L	G	.	D	L	D	K	S	L	E	T	C	V	E	G	I	D	N	D	E	A	E	G	T	T	E	L	L	L	L	A	I	E	V	A	L	L	N	N	N	V	S	T	A	S	T	I	F	D	N	Y	T	N	A	I	E	D	T	V	S	G
Template Known Secondary structure		T	T	S																		T	.														T	T	T	T	S	S	S															T	T														T	T		T	T	T			S
Template Predicted Secondary structure																							.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
							343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	A	W	Y	L	D	L	A	T	D	I	D	L	G	Q	N	K	A	N	E	A	I	N	R	L	K	N	A	R	D	L	R	T	N	P	V	L	Q	L	N	L	A	N	A	Y	L	Q	G	G	Q	P	Q	E	A	A	N	I	L	N	R	Y	T	F	N	N	K	D	D	S	N	G	W	D	L	L	A
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																																																						.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		D	N	E	X	I	L	N	L	A	E	S	Y	I	K	F	A	T	N	K	E	T	A	T	S	N	F	Y	Y	Y	E	E	L	S	Q	T	F	P	T	W	K	T	Q	L	G	L	L	N	L	H	L	Q	Q	R	N	I	A	E	A	Q	G	I	V	E	L	L	L	S	D	Y	Y	S	V	E	Q	.	.	.	.	.	.
Template Known Secondary structure		S	T																	T	T	T	T	T													S		S														T	T														S					T	T	T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	E	A	A	L	N	N	R	D	Q	E	L	A	A	R	A	E	G	Y	A	L	A	G	R	L	D	Q	A	I	S	L	L	S	S	A	S	S	Q	V	K	L	G	S	L	Q	Q	A	R	Y	D	A	R	I	D	Q	L	R	Q	L	Q	E	R	F	K	P	Y	T
Query Conservation
Alig confidence		.																									.	.																		.	.	.	.
Template Conservation		.																									.	.																		.	.	.	.
Template Sequence		.	K	E	N	A	V	L	Y	K	P	T	F	L	A	N	Q	I	T	L	A	L	X	Q	G	L	.	.	D	T	E	D	L	T	N	Q	L	V	K	L	D	H	E	H	A	.	.	.	.	F	I	K	H	H	Q	E	I	D	A	K	F	D	E	L	V	R	K	Y	D
Template Known Secondary structure		.						T	T															T	T		.	.	T	T										T	T			S		.	.	.	.																		T	T
Template Predicted Secondary structure		.																									.	.																		.	.	.	.
Template SS confidence
			233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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