Job Description P66948 Confidence 96.62% Date Thu Jan 5 12:10:22 GMT 2012 Rank 109 Aligned Residues 179 % Identity 11% Template c3e4bD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:algk; PDBTitle: crystal structure of algk from pseudomonas fluorescens wcs374r Resolution 2.50 Å

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		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		S	S	E	D	F	Y	L	A	K	A	R	T	L	G	M	Y	N	S	G	R	N	Q	L	T	S	D	L	L	D	E	W	A	K	G	N	V	R	Q	Q	R	A	A	Q	Y	G	R	A	L	Q	A	M	E	A	N	.	K	Y	D	E	A	R	K	T	L	Q	P	L	L	A	A	E	P	G	N	A	W	Y	L	D	L
Query Conservation																																																								.
Alig confidence																																							.	.	.	.														.
Template Conservation																																							.	.	.	.
Template Sequence		P	E	A	G	L	A	Q	V	L	L	Y	R	T	Q	G	T	Y	D	Q	H	L	D	D	V	E	R	I	C	K	A	A	L	N	T	T	D	I	.	.	.	.	C	Y	V	E	L	A	T	V	Y	Q	K	Q	P	E	Q	Q	A	E	L	L	K	Q	M	E	A	G	V	S	R	G	T	V	T	A	Q	R	V	D	S
Template Known Secondary structure		T	T													S		T	T	T													T	T	T		T	T	.	.	.	.													G	G	G															T		S
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		349	350	.	.	.	.				.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.				.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure								.	.	.																																			.	.	.
Query SS confidence								.	.	.																																			.	.	.
Query Sequence		A	T	D	I	D	L	.	.	.	G	Q	N	K	A	N	E	A	I	N	R	L	K	N	A	R	D	L	R	T	N	P	V	L	Q	L	N	L	A	N	A	Y	L	Q	.	.	.	G	G	Q	P	Q	E	A	A	N	I	L	N	R	Y	T	F	N	N	K	D	D	S	N	G	W	D	L	L	A	Q	A	E	A	A
Query Conservation								.	.	.																																			.	.	.
Alig confidence								.	.	.																		.																	.	.	.																			.	.
Template Conservation																												.																																						.	.
Template Sequence		V	A	R	V	L	G	D	A	T	L	G	T	P	D	E	K	T	A	Q	A	L	L	E	K	I	A	.	P	G	Y	P	A	S	W	V	S	L	A	Q	L	L	Y	D	F	P	E	L	G	D	V	E	Q	M	M	K	Y	L	D	N	G	R	A	A	D	.	.	Q	P	R	A	E	L	L	L	G	K	L	Y	Y	E
Template Known Secondary structure							T		T	T	S	S	S														T	.	T	T	S	T														T	T	S																T	T	.	.
Template Predicted Secondary structure																												.																																						.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.
		423																			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.					440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	R	D	Q	E	L	A	A	R	A	E	G	Y	A	L	.	.	.	.	A	G	R	L	D	Q	A	I	S	L	L	S	S	A	S	S
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		G	K	W	V	P	A	D	A	K	A	A	E	A	H	F	E	K	A	V	G	R	E	V	A	A	D	Y	Y	L	G	Q	I	Y	R	R	G	Y	L	G	K	V	Y	P	Q	K	A	L	D	H	L	L	T	A	A	R
Template Known Secondary structure			S	S	S													T	T	T	T	T															T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions