Job Description P66948 Confidence 99.40% Date Thu Jan 5 12:10:22 GMT 2012 Rank 43 Aligned Residues 219 % Identity 6% Template c3draA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein PDBTitle: candida albicans protein geranylgeranyltransferase-i2 complexed with ggpp Resolution 1.80 Å

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		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	S	E	D	F	Y	L	A	K	A	R	T	L	G	M	Y	N	S	G	R	N	Q	L	T	S	D	L	L	D	E	W	A	K	G	N	V	R	Q	Q	R	A	A	Q	Y	G	R	A	L	Q	A	M	E	A	N	K	Y	D	E	A	R	K	T	L	Q	P	L	L	A	A	E	P	G	N	A	W	Y	L	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	D	Y	K	Q	I	M	G	L	L	L	A	L	M	K	A	E	E	Y	S	E	R	A	L	H	I	T	E	L	G	I	N	E	L	A	S	H	Y	T	I	W	I	Y	R	F	N	I	L	K	N	L	P	N	R	N	L	Y	D	E	L	D	W	C	E	E	I	A	L	D	N	E	K	N	Y	Q	I	W	N	Y
Template Known Secondary structure																		T	T			S															T	T														T		T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.								.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.			.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.															.																	.	.
Query SS confidence												.	.	.	.	.	.	.															.																	.	.
Query Sequence		A	T	D	I	D	L	G	Q	N	K	.	.	.	.	.	.	.	A	N	E	A	I	N	R	L	K	N	A	R	D	L	.	R	T	N	P	V	L	Q	L	N	L	A	N	A	Y	L	Q	.	.	G	G	Q	P	Q	E	A	A	N	I	L	N	R	Y	T	F	N	N	K	D	D	S	N	G	W	D	L	L	A	Q
Query Conservation												.	.	.	.	.	.	.															.																	.	.
Alig confidence												.	.	.	.	.	.	.															.																	.	.
Template Conservation
Template Sequence		R	Q	L	I	I	G	Q	I	M	E	L	N	N	N	D	F	D	P	Y	R	E	F	D	I	L	E	A	M	L	S	S	D	P	K	N	H	H	V	W	S	Y	R	K	W	L	V	D	T	F	D	L	H	N	D	A	K	E	L	S	F	V	D	K	V	I	D	T	D	L	K	N	N	S	A	W	S	H	R	F	F
Template Known Secondary structure													T	T	T				T															T	T															T	T		T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		419	420	.	.	.	.																								.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440					.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		A	E	A	A	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	D	Q	E	L	A	A	R	A	E	G	Y	A	L	A	.	.	.	.	G	R	L	D	Q	A	I	S	L	L	S	S	A	S	S	Q	V	K	L	G	S	L	Q	Q	A	R	Y	D	A	R	I
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		L	L	F	S	K	K	H	L	A	T	D	N	T	I	D	E	E	L	N	Y	V	K	D	K	I	V	K	C	P	Q	N	P	S	T	W	N	Y	L	L	G	I	H	E	R	F	D	R	S	I	T	Q	L	E	E	F	S	L	Q	F	V	D	L	E	K	D	Q	V	T	S	S	F	A	L	E	T	L	A	K	I	Y
Template Known Secondary structure					S	S	G	G	G																					S	S															T	T			G	G	G	G						T	T			G	G	G	T			S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	L	R	Q	L	Q	E	R	F	K	P	Y	T	K	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	Q	K	K	Y	N	E	S	R	T	V	Y	D	L	L
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions