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Job DescriptionP66948
Confidence99.25%DateThu Jan 5 12:10:22 GMT 2012
Rank54Aligned Residues180
% Identity11%Templatec2yhcA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:upf0169 lipoprotein yfio; PDBTitle: structure of bamd from e. coli
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   308.310.........320.........330.........340.. .......350.........360.........370..... .
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Query Sequence  QRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGN. . . AWYLDLATDIDLGQNKANEAINRLKNARDLRTN. . . . . . . . P
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Template Sequence  PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY
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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   377..380.........390.........400.........410.........420.........430.........440.........450......
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Query Sequence  VLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQ
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Template Sequence  MRGLTNMALDDDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRD
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   457..460.. .......470.........480.......
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Query Sequence  VKLGSL. . . QQARYDARIDQLRQLQERFKPYTKM
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Template Sequence  YPDTQATRDALPLMENAYRQMQMNAQAEKVAKII
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   185....190.........200.........210........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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