Job Description P66948 Confidence 99.25% Date Thu Jan 5 12:10:22 GMT 2012 Rank 53 Aligned Residues 187 % Identity 16% Template c2ifuA_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:gamma-snap; PDBTitle: crystal structure of a gamma-snap from danio rerio Resolution 2.60 Å

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		290	.	.	.	.	.	.	.	.	.	300	.	.									.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.							.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.													.																														.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.													.																														.	.	.	.	.	.
Query Sequence		N	Q	L	T	S	D	L	L	D	E	W	A	K	.	.	.	.	.	.	.	.	G	N	V	R	Q	Q	R	A	A	Q	Y	G	.	R	A	L	Q	A	M	E	A	N	K	Y	D	E	A	R	K	T	L	Q	P	L	L	A	A	E	P	G	N	A	.	.	.	.	.	.	W	Y	L	D	L	A	T	D	I	D	L
Query Conservation															.	.	.	.	.	.	.	.													.																														.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.													.																														.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	A	H	E	H	I	A	K	A	E	K	Y	L	K	T	S	F	X	K	W	K	P	D	Y	D	S	A	A	S	E	Y	A	K	A	A	V	A	F	K	N	A	K	Q	L	E	Q	A	K	D	A	Y	L	Q	E	A	E	A	H	A	N	N	R	S	L	F	H	A	A	K	A	F	E	Q	A	G	X	X	L	K
Template Known Secondary structure																			S	S	S		S																				T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.							.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.							.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																			.	.	.	.	.	.																																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.																																			.	.	.	.	.	.
Query Sequence		G	Q	N	K	A	N	E	A	I	N	R	L	K	N	A	R	D	.	.	.	.	.	.	L	R	T	N	P	V	L	Q	L	N	L	A	N	A	Y	L	Q	G	G	Q	P	Q	E	A	A	N	I	L	N	R	Y	T	F	N	.	.	.	.	.	.	N	K	D	D	S	N	G	W	D	L	L	A	Q	A	E	A	A
Query Conservation																			.	.	.	.	.	.																																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	Q	R	X	P	E	A	V	Q	Y	I	E	K	A	S	V	X	Y	V	E	N	G	T	P	D	T	A	A	X	A	L	D	R	A	G	K	L	X	E	P	L	D	L	S	K	A	V	H	L	Y	Q	Q	A	A	A	V	F	E	N	E	E	R	L	R	Q	A	A	E	L	I	G	K	A	S	R	L	L	V	R
Template Known Secondary structure			T	T		G	G	G	G													T	T	T																	T	T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		423	.	.	.	.	.	.																								430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		L	N	N	R	D	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	R	A	E	G	Y	A	L	A	G	R	L	D	Q	A	I	S	L	L	S	S	A	S	S	Q	V	K	.	L	G	S	L	Q	Q	A	R	Y	D	A	R	I	D	Q	L	R	Q
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		Q	Q	K	F	D	E	A	A	A	S	L	Q	K	E	K	S	X	Y	K	E	X	E	N	Y	P	T	C	Y	K	K	C	I	A	Q	V	L	V	Q	L	H	R	A	D	Y	V	A	A	Q	K	C	V	R	E	S	Y	S	I	P	G	F	S	G	S	E	D	C	A	A	L	E	D	L	L	Q	A	Y	D	E
Template Known Secondary structure		T	T																			T	T																			T	T													T	T	S	T	T	S	T	T	S															T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions