Job Description P66948 Confidence 99.49% Date Thu Jan 5 12:10:22 GMT 2012 Rank 31 Aligned Residues 141 % Identity 22% Template c2e2eA_ PDB info PDB header:lyase Chain: A: PDB Molecule:formate-dependent nitrite reductase complex nrfg subunit; PDBTitle: tpr domain of nrfg mediates the complex formation between heme lyase2 and formate-dependent nitrite reductase in escherichia coli o157:h7 Resolution 2.05 Å

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		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.				.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.																.	.	.
Query SS confidence																																																					.																.	.	.
Query Sequence		A	N	K	Y	D	E	A	R	K	T	L	Q	P	L	L	A	A	E	P	G	N	A	W	Y	L	D	L	A	T	D	I	D	L	G	Q	N	K	A	N	E	A	I	N	R	L	K	N	A	R	D	L	.	R	T	N	P	V	L	Q	L	N	L	A	N	A	Y	L	.	.	.	Q	G	G	Q	P	Q	E	A	A	N
Query Conservation																																																					.																.	.	.
Alig confidence																																																					.																.	.	.
Template Conservation
Template Sequence		H	Q	F	A	E	A	Q	L	Q	A	L	Q	D	K	I	R	A	N	P	Q	N	S	E	Q	W	A	L	L	G	E	Y	Y	L	W	Q	N	D	Y	S	N	S	L	L	A	Y	R	Q	A	L	Q	L	R	G	E	N	A	E	L	Y	A	A	L	A	T	V	L	Y	Y	Q	A	S	Q	H	M	T	A	Q	T	R	A
Template Known Secondary structure																					S															T	T																		S																T	T	T
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	N	R	Y	T	F	N	N	K	D	D	S	N	G	W	D	L	L	A	Q	A	E	A	A	L	N	N	R	D	Q	E	L	A	A	R	A	E	G	Y	A	L	A	G	R	L	D	Q	A	I	S	L	L	S	S	A	S	S	Q	V	K	L	G	S	L	Q	Q	A	R	Y	D	A	R	I	D	Q	L	R	Q	L
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		M	I	D	K	A	L	A	L	D	S	N	E	I	T	A	L	M	L	L	A	S	D	A	F	M	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	A	Q	A	I	E	L	W	Q	K	V	M	D	L	N	S	P	R	I	N	R	T	Q	L	V	E	S	.	I	N	M	A	K	L	L
Template Known Secondary structure											T	T															T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T			T	T	S									.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.
		478	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		194	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions