Phyre 2 alignment of P0A8B2 with c1x0lB

Job Description P0A8B2
Confidence 16.89% Date Thu Jan 5 11:07:22 GMT 2012

Rank 29 Aligned Residues 63

% Identity 6% Template c1x0lB_

PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:homoisocitrate dehydrogenase; PDBTitle: crystal structure of tetrameric homoisocitrate dehydrogenase from an2 extreme thermophile, thermus thermophilus

Resolution 1.85 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.
Query Sequence	R	G	D	Y	S	P	E	L	F	L	D	L	H	G	L	T	Q	L	Q	A	K	Q	E	L	G	A	L	I	A	A	C	R	R	E	H	V	F	C	A	C	V	M	H	G	H	G	K	.	.	.	.	.	.	H	I	L	K	Q	Q	T	P	L	W	L	A	Q	H	P	H	V
Query Conservation																																																.	.	.	.	.	.
Alig confidence																																												.				.	.	.	.	.	.
Template Conservation																																												.
Template Sequence	Q	E	R	R	Y	L	D	V	A	I	A	D	A	V	I	S	K	K	A	S	E	R	I	G	R	A	A	L	R	I	A	E	G	R	P	R	K	T	L	H	I	A	H	.	K	A	N	V	L	P	L	T	Q	G	L	F	L	D	T	V	K	E	V	A	K	D	F	P	L	V
Template Known Secondary structure						T	T																										T	S	T	T								.		T	T	T		T	T														T	T		T	T	S
Template Predicted Secondary structure																																												.
Template SS confidence
	128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

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Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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