Job Description P21189 Confidence 94.30% Date Thu Jan 5 11:38:01 GMT 2012 Rank 44 Aligned Residues 146 % Identity 11% Template d2hhva1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 1.55

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	I	D	I	E	T	T	R	H	G	E	L	Y	C	I	G	L	E	G	C	G	Q	R	I	V	Y	M	L	G	P	E	N	G	D	A	S	S	L	D	F	E	L	E	Y	V	A	S	R	P	Q	L	L	E	K	L	N	A	W	F	A	N	Y	D	P	D	V	I	I	G	W	N	V	V	Q	F	D	L	R	M
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																																.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																																.	.	.	.	.
Template Sequence		A	A	L	V	V	E	V	V	E	E	N	.	.	.	.	.	.	.	.	.	Y	H	D	A	P	I	V	G	I	A	V	V	N	E	H	.	.	.	.	.	.	G	R	F	F	L	R	P	E	T	A	L	A	D	P	Q	F	V	A	W	L	G	D	E	T	K	K	K	S	M	F	D	.	.	.	.	.	S	K	R
Template Known Secondary structure										S	S	S	.	.	.	.	.	.	.	.	.		T	T											T	T	.	.	.	.	.	.											T	T											T	T	S					S	S	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																																.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.										.	.	.	330	.	.	.	.	.	.	.	.	.	340	.							.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.						.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	K	H	A	E	R	Y	R	L	P	L	R	L	G	R	D	N	S	E	L	E	W	R	E	H	G	F	K	N	G	V	F	F	A	Q	A	K	G	R	L	I	I	D	G	I	E	A	L	K	S	A	F	W	N	F	S	S	F	S	L	E	T	V	A	Q	E	L	L	G	E	G	K	S	I	D	N	P	W	D
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																												.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																												.	.
Template Sequence		A	A	V	A	L	K	W	K	G	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	G	V	S	F	.	D	L	L	L	A	A	Y	L	L	D	P	A	Q	G	V	D	D	V	A	A	A	A	K	M	K	Q	Y	.	.	E	A	V	R	P	D	E	A
Template Known Secondary structure								T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.											G	G	G				S							T	T	T		.	.		S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																												.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.																										.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.			420	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	D	E	I	D	R	R	F	A	E	D	K	P	A	L	A	T	Y	N	L	K	D	C	E	L	V	T	Q	I	F	H	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	G	K	G	A	K	R	A	V	P	D	E	P	V	L	A	E	H	L	V	R	K	A	A	A	I	W	E	L	E	R	P	F
Template Known Secondary structure					S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions