 |
Job Description | P21189 | Confidence | 8.93% | Date | Thu Jan 5 11:38:01 GMT 2012 |
Rank | 98 | Aligned Residues | 64 |
% Identity | 23% | Template | d2d5ra1 |
SCOP info | Ribonuclease H-like motif
| Ribonuclease H-like
| CAF1-like ribonuclease
|
Resolution | 2.50 |
|
 |
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | I | G | W | N | V | V | Q | F | D | L | R | M | L | Q | K | H | A | E | R | Y | R | L | P | L | R | L | G | R | D | N | S | E | L | E | W | R | E | H | G | F | K | N | G | V | F | F | A | Q | A | K | G | R | L | I | I | D | G | I | E | A | L | K | S | A | F | W | N | F | S | S | F | S | L | E | T | V | A | Q | E |
Query Conservation |   |
|   |
|
|
|   |   |   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   | . |   |
|   |   |   |
|   |
|   |   |   |
|   |   |
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |
|
|   |   |   | . | . |   |   |   |   |   |   |
|   |   |
|
|   |   |
Template Sequence |   |
W | L | S | F | H | S | G | . |
Y | D | F | G | Y | L | I | K | I | L | T | N | S | N | L | P | E | E | E | L | D | F | F | E | I | L | R | L | F | F | P | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | Y | D | V | K | Y | L | M | K | S | C | . |
. |
K | N | L | K | G | G | L | Q | E | V | A | E | Q |
Template Known Secondary structure |   |
 |  |  | S | S |
|  | . |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |
| S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | G | G | G |
| . | . | T | T |
|
| S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
153 | . | . | . | . | . | . | |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 200 | . | . | |
|
. | . | . | . | . | . | . | 210 | . | . | . | . | . |
  |
  |   |
300 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
L |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
L |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
216 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|